Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01138 ATGTTCAAGCAACCCATGCTGTTGATCTCGCTTTTGTTTCTTTCCAATGTGTTATTCGCTGTCCTTGTTTCAGGTACTTCCTCATGTTCCATAGACCTCAGCTACGTAAACACATATCCATGGGACACATCAACTTGTCATCCATCTGATGGGAAGCAATGCTGCCAGACTCTTCTCAGCCTCTTTGGGATGGGCCTTGCTCAACATCTCAAAGACACTGGAATCTTTCAACTTCCAGATTTTGAGTCTTCCTCTTCATGCTTATCTGAACTTCAAGACAGGCTAGCTTCCTTGTCCATCCAGCCTTCTGTTGTCCCTCTTTGCTTTCAGAACTCCACTCAGTTTGTTGTCAACGCTTCAAGTTGTGCAGGAATTGTAACAACAAAGGATTGGATCAACAGAGTGGGTCCTAGTTCTGTGTTGGACGCAAACTGTAAAGGTGGAAGGACGGGGTTAACCTGGTGTAGCACTTGTCTTGAAGCTGGCATGACTGTGAATTCTCAGTTGAAAGCTTTGTCCCCTAATTCAACAGAGTGCTTCTACTTCACCGTCTTGTATGCTGCAGCAATTGCTAATGAGTTTGGTCCAAAAGATGCAAGAACGGCAAGCTGCATACTTGGCTTGCCACTGTCTAACTCAGCTTCAACAAGCAAAATGAGCAGAAAAACAGTTTTGAAATGGGTTATTGGTCTTTTCGGTGCTCTTATTGGTGTGTTGCTTGCTCTTGTATTAATCATACTTCACAGGAAAAGGGACAAGAAAATGGATGTTTGGCATACAGATATTGAGCACAGCTCAAAAGGCAGTAGTGTTTTGCCGAAGACAGGAGCTAAATGGTTCCGTCTATCCGAGTTAGAACGAGCAACGGATGGATTTTCGCAGAAGAACCTTGTTGGTCAAGGTGCCTATGGAGTTGTGTACAAAGGAATACTTTCAGATGGCACTTTGATTGCAGTCAAAGAAATGCTTGACTTGGATTCAAAAGGGGATGAAGATTTTTCCAATGAGGTTGAGATCATAAGCAAAATTAAGCACAGAAATCTTCTATCTCTGCACGGTTGCTGTGTTACAGGTGACAATGTTAAGCGTAAGAGAAGATTTTTAGTCTATGATTTCATGAGTAATGGAAGCATTAGTGACCAGTTATTTGGTTACGGAGCTCATGGGAGATTAACATGGCCACAAAGAAAGAACATCATTCTTGATATAGCAAAAGGGCTTGAATACTTGCACCATGGAATCAAACCTCCTGTCTATCACAGAGACATAAAGGCTACCAACATATTATTGGATTCTGAGATGAGGGCTAAAGTTGCAGATTTTGGGTTGGCAAAGCAAGGGAATGAAGATTGGGCTTGGATGCTTGCAAAATCAGGGAAAGTGGAGGCCATATTTGATCAAGCGATTGAGGAAGGACCAACAACAGTCATGGAGAGGTTTGTCCTAGTTGGGATTCTCTGTGCACATGTGATGGTGGCATTGAGGCCAACCATTGCTGATGCCATCAAGATGTTGGAGGGTGATATTGATATTCATGATTTACATGACAGGCCATTGCCTCTAGGTCATGAATCCTTTCGATCTTCTCTATCTCCAATCCATCGAGTGGAAGAAAAAAAAAGTTCAAACGGCAGCAGGGCATATCTGAGAGTTTGA 1656 0.4281 MFKQPMLLISLLFLSNVLFAVLVSGTSSCSIDLSYVNTYPWDTSTCHPSDGKQCCQTLLSLFGMGLAQHLKDTGIFQLPDFESSSSCLSELQDRLASLSIQPSVVPLCFQNSTQFVVNASSCAGIVTTKDWINRVGPSSVLDANCKGGRTGLTWCSTCLEAGMTVNSQLKALSPNSTECFYFTVLYAAAIANEFGPKDARTASCILGLPLSNSASTSKMSRKTVLKWVIGLFGALIGVLLALVLIILHRKRDKKMDVWHTDIEHSSKGSSVLPKTGAKWFRLSELERATDGFSQKNLVGQGAYGVVYKGILSDGTLIAVKEMLDLDSKGDEDFSNEVEIISKIKHRNLLSLHGCCVTGDNVKRKRRFLVYDFMSNGSISDQLFGYGAHGRLTWPQRKNIILDIAKGLEYLHHGIKPPVYHRDIKATNILLDSEMRAKVADFGLAKQGNEDWAWMLAKSGKVEAIFDQAIEEGPTTVMERFVLVGILCAHVMVALRPTIADAIKMLEGDIDIHDLHDRPLPLGHESFRSSLSPIHRVEEKKSSNGSRAYLRV* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01138 551 Pfam SPARK 26 179 IPR043891 -
Pte16g01138 551 SMART serkin_6 292 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01138 551 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Pte16g01138 551 Gene3D Phosphorylase Kinase; domain 1 253 372 - -
Pte16g01138 551 FunFam Os07g0541700 protein 373 457 - -
Pte16g01138 551 Pfam Protein kinase domain 293 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01138 551 SUPERFAMILY Protein kinase-like (PK-like) 269 454 IPR011009 -
Pte16g01138 551 FunFam Receptor-like serine/threonine-protein kinase At4g25390 258 372 - -
Pte16g01138 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Pte16g01138 551 MobiDBLite consensus disorder prediction 532 551 - -
Pte16g01138 551 ProSiteProfiles Protein kinase domain profile. 292 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01138 551 Gene3D Transferase(Phosphotransferase) domain 1 373 450 - -
Pte16g01138 551 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Pte16g01138 551 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 450 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01138 Pte-Chr16 31015395 31018234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01138 21 449 Receptor kinase-like Gene Family AT1G11050 47.836 3.10e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Pte16g01138 Pkinase 3.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01138 - - aprc:113874294 592.038