Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01134 ATGGCACAAAAGAAAGCTGAGCGTGAGCACATCTTGCGGCATCACTTTGAGGAGAAGCGTAAGGGGCAAATGATGAAGTACAAGGGATCAAATCTTTATGTTAAGAACGTTGCTGACAGTGTAATTGATGAAGATCTAGAAAGAACTTTAGCATGTATGGCACAATCACTTCAGCAAGGGGTTTGGATTTCCATGGAGTCACTGACTTTTTCATCACCGATCCTTCAACAGAACCGTAATTTGAGTAAATTGGCGTCCGTCTCCATTAATGGCATACACAGAACAAACCAAGTCTGCGTTCAACGACGCTTTAAGCCATTCATCAAAGCTACACCATCTGAGCCCCCAACGGAAATCTCCCAACAACAACAATCACAGCTACAGACTGTTCCTTCCCGGAAAGACCCCTTAACTGTTTCTTCTCCAGCTTCTCAGACAAAAGTCAAGACGAATTCTCTTCAATATCCACCTGGCTATCTCGGGGCCGTGCCGGACCGCAAGTTCAGTGACTGGAACAATAACGACATCAATGCAATGGGTTATTTGACTGGTATTCTTTCTGCTAAAGTGTATGATGTTGCCGAGGAATCCCCCTTGCAGGAAGCAACCAAGCTCTCCCAGAGGCTGGGTGTCAAAATTTGGCTGAAGAGGGAGGATTTGCAACCTGTTTTCTCTTTTAAGCTCCGTGGAGCTTATAACATGATGGCAAAACTTCCAAAAGAACTGTTGGAAAAAGGGGTCATATGTTCATCAGCTGGAAATCATGCTCAAGGGGTTGCTTTAGCTGCCCAGAAACTTGGTTGTAGTGCTGTTATTGTTATGCCTGTTACTACTCCAGAAATTAAGTGGAAGTCTGTTGAGAAGCTGGGTGCAACTGTTGTTCTTGTGGGAGATTCATATGATGAAGCACAAGCTTATGCAAAGAAACGTGGAAAAGAGGAGGGCCGTACATTTATACCTCCTTTTGATCATCCAGATATCATCATGGGACAGGGAACAGTTGGGATGGAAATTGTGCGCCAAATGCAGGGTCCCTTGCATGCTATATTTGTTCCAGTTGGAGGCGGCGGACTGATTGCTGGTATTGCTGCCTATGTTAAGCAGCTTTGTCCAGAGGTCAAGGTTATTGGGGTGGAGCCTAACGACGCCAATGCCATGGCATTGTCATTACATCATGATCAGAGGGTGATGTTGGATAAGGTTGGAGGTTTTGCAGATGGTGTAGCTGTTAAGGAGGTTGGTGAAGAAACTTTTCGCATATGCAAGAAATTAATAGATGGTGTGGTTCTTGTTGGTCGGGACTCTATCTGTGCATCAATTAAGGACATGTTCGAGGAGAAAAGGAGCATTTTGGAACCTGCAGGTGCTCTTGCTCTAGCTGGAGCAGAAGCATACTGCAAGTATTATGGTCTCAAGGGAAAACATGTTGTAGCCATAACTAGTGGGGCAAACATGAACTTTGATAAACTGAGAGTTGTAACGGAACTCGCCAATGTTGGTAGGAAACAGGAGGCCCTTCTTGCAACAGTTATGCCAGAAGAGCCTGGGAGTTTTAAAAGTTTTTGTGAGTTGGTGGGGCCCATGAATATCACTGAGTTCAAATACAGATATGATTCTGAGAAAGCCGCGGTAGTGCTGTACAGTGTTGGAGTCCATACCGCTTCTGAACTTCGAGAGATGCAAGAGAGGATGCAAGCTTCTAAACTTCAAACTTACAACCTGACAAAAAGCGACTTGGTTAAAGATCATCTGCGTTACCTGATGGGAGGCAGATCAAATCTTCAAAACGAAGTTCTTTGCCGTTTCACATTTCCAGAAAGGCCCGGTGCTCTGATGAAGTTCTTAGACTCCTTCAGTCCGCGCTGGAATATTAGTTTGTTTCATTATCGTGGCCAGGGTGAAACCGGTGCAAATGTATTGGTTGGGATAGAGATACCTAGGACTGAAATGGACGAATTCCATGATCGTGCTGACAGACTCGGATATGATTACACAGTTGTGACAAATAATTCTGTTTTCCAACTTTTGATGCATTAG 2037 0.4448 MAQKKAEREHILRHHFEEKRKGQMMKYKGSNLYVKNVADSVIDEDLERTLACMAQSLQQGVWISMESLTFSSPILQQNRNLSKLASVSINGIHRTNQVCVQRRFKPFIKATPSEPPTEISQQQQSQLQTVPSRKDPLTVSSPASQTKVKTNSLQYPPGYLGAVPDRKFSDWNNNDINAMGYLTGILSAKVYDVAEESPLQEATKLSQRLGVKIWLKREDLQPVFSFKLRGAYNMMAKLPKELLEKGVICSSAGNHAQGVALAAQKLGCSAVIVMPVTTPEIKWKSVEKLGATVVLVGDSYDEAQAYAKKRGKEEGRTFIPPFDHPDIIMGQGTVGMEIVRQMQGPLHAIFVPVGGGGLIAGIAAYVKQLCPEVKVIGVEPNDANAMALSLHHDQRVMLDKVGGFADGVAVKEVGEETFRICKKLIDGVVLVGRDSICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGKHVVAITSGANMNFDKLRVVTELANVGRKQEALLATVMPEEPGSFKSFCELVGPMNITEFKYRYDSEKAAVVLYSVGVHTASELREMQERMQASKLQTYNLTKSDLVKDHLRYLMGGRSNLQNEVLCRFTFPERPGALMKFLDSFSPRWNISLFHYRGQGETGANVLVGIEIPRTEMDEFHDRADRLGYDYTVVTNNSVFQLLMH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01134 678 Gene3D - 198 476 IPR036052 -
Pte16g01134 678 MobiDBLite consensus disorder prediction 114 150 - -
Pte16g01134 678 ProSiteProfiles ACT-like domain profile. 598 669 IPR001721 -
Pte16g01134 678 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 174 532 IPR036052 -
Pte16g01134 678 Gene3D Biosynthetic Threonine Deaminase; Domain 3 504 678 IPR038110 -
Pte16g01134 678 CDD ACT_ThrD-I_1 504 587 - -
Pte16g01134 678 CDD ACT_ThrD-I_2 597 677 - -
Pte16g01134 678 SUPERFAMILY ACT-like 585 677 IPR045865 -
Pte16g01134 678 Pfam Pyridoxal-phosphate dependent enzyme 194 482 IPR001926 -
Pte16g01134 678 ProSiteProfiles ACT-like domain profile. 505 576 IPR001721 -
Pte16g01134 678 CDD Thr-dehyd 185 486 - -
Pte16g01134 678 Gene3D - 230 321 IPR036052 -
Pte16g01134 678 FunFam Threonine dehydratase 504 678 - -
Pte16g01134 678 MobiDBLite consensus disorder prediction 111 150 - -
Pte16g01134 678 Pfam C-terminal regulatory domain of Threonine dehydratase 495 584 IPR001721 -
Pte16g01134 678 Pfam C-terminal regulatory domain of Threonine dehydratase 590 675 IPR001721 -
Pte16g01134 678 PANTHER THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED 185 677 - -
Pte16g01134 678 FunFam L-threonine dehydratase 296 476 - -
Pte16g01134 678 NCBIfam threonine ammonia-lyase, biosynthetic 181 676 IPR005787 GO:0004794|GO:0009097
Pte16g01134 678 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 218 231 IPR000634 GO:0006520|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01134 Pte-Chr16 30982847 30987988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01134 2 73 Eukaryotic Initiation Factors Gene Family AT1G71770 37.975 8.47e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01134 K01754 - qsa:O6P43_009491 923.309