Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01134 | ATGGCACAAAAGAAAGCTGAGCGTGAGCACATCTTGCGGCATCACTTTGAGGAGAAGCGTAAGGGGCAAATGATGAAGTACAAGGGATCAAATCTTTATGTTAAGAACGTTGCTGACAGTGTAATTGATGAAGATCTAGAAAGAACTTTAGCATGTATGGCACAATCACTTCAGCAAGGGGTTTGGATTTCCATGGAGTCACTGACTTTTTCATCACCGATCCTTCAACAGAACCGTAATTTGAGTAAATTGGCGTCCGTCTCCATTAATGGCATACACAGAACAAACCAAGTCTGCGTTCAACGACGCTTTAAGCCATTCATCAAAGCTACACCATCTGAGCCCCCAACGGAAATCTCCCAACAACAACAATCACAGCTACAGACTGTTCCTTCCCGGAAAGACCCCTTAACTGTTTCTTCTCCAGCTTCTCAGACAAAAGTCAAGACGAATTCTCTTCAATATCCACCTGGCTATCTCGGGGCCGTGCCGGACCGCAAGTTCAGTGACTGGAACAATAACGACATCAATGCAATGGGTTATTTGACTGGTATTCTTTCTGCTAAAGTGTATGATGTTGCCGAGGAATCCCCCTTGCAGGAAGCAACCAAGCTCTCCCAGAGGCTGGGTGTCAAAATTTGGCTGAAGAGGGAGGATTTGCAACCTGTTTTCTCTTTTAAGCTCCGTGGAGCTTATAACATGATGGCAAAACTTCCAAAAGAACTGTTGGAAAAAGGGGTCATATGTTCATCAGCTGGAAATCATGCTCAAGGGGTTGCTTTAGCTGCCCAGAAACTTGGTTGTAGTGCTGTTATTGTTATGCCTGTTACTACTCCAGAAATTAAGTGGAAGTCTGTTGAGAAGCTGGGTGCAACTGTTGTTCTTGTGGGAGATTCATATGATGAAGCACAAGCTTATGCAAAGAAACGTGGAAAAGAGGAGGGCCGTACATTTATACCTCCTTTTGATCATCCAGATATCATCATGGGACAGGGAACAGTTGGGATGGAAATTGTGCGCCAAATGCAGGGTCCCTTGCATGCTATATTTGTTCCAGTTGGAGGCGGCGGACTGATTGCTGGTATTGCTGCCTATGTTAAGCAGCTTTGTCCAGAGGTCAAGGTTATTGGGGTGGAGCCTAACGACGCCAATGCCATGGCATTGTCATTACATCATGATCAGAGGGTGATGTTGGATAAGGTTGGAGGTTTTGCAGATGGTGTAGCTGTTAAGGAGGTTGGTGAAGAAACTTTTCGCATATGCAAGAAATTAATAGATGGTGTGGTTCTTGTTGGTCGGGACTCTATCTGTGCATCAATTAAGGACATGTTCGAGGAGAAAAGGAGCATTTTGGAACCTGCAGGTGCTCTTGCTCTAGCTGGAGCAGAAGCATACTGCAAGTATTATGGTCTCAAGGGAAAACATGTTGTAGCCATAACTAGTGGGGCAAACATGAACTTTGATAAACTGAGAGTTGTAACGGAACTCGCCAATGTTGGTAGGAAACAGGAGGCCCTTCTTGCAACAGTTATGCCAGAAGAGCCTGGGAGTTTTAAAAGTTTTTGTGAGTTGGTGGGGCCCATGAATATCACTGAGTTCAAATACAGATATGATTCTGAGAAAGCCGCGGTAGTGCTGTACAGTGTTGGAGTCCATACCGCTTCTGAACTTCGAGAGATGCAAGAGAGGATGCAAGCTTCTAAACTTCAAACTTACAACCTGACAAAAAGCGACTTGGTTAAAGATCATCTGCGTTACCTGATGGGAGGCAGATCAAATCTTCAAAACGAAGTTCTTTGCCGTTTCACATTTCCAGAAAGGCCCGGTGCTCTGATGAAGTTCTTAGACTCCTTCAGTCCGCGCTGGAATATTAGTTTGTTTCATTATCGTGGCCAGGGTGAAACCGGTGCAAATGTATTGGTTGGGATAGAGATACCTAGGACTGAAATGGACGAATTCCATGATCGTGCTGACAGACTCGGATATGATTACACAGTTGTGACAAATAATTCTGTTTTCCAACTTTTGATGCATTAG | 2037 | 0.4448 | MAQKKAEREHILRHHFEEKRKGQMMKYKGSNLYVKNVADSVIDEDLERTLACMAQSLQQGVWISMESLTFSSPILQQNRNLSKLASVSINGIHRTNQVCVQRRFKPFIKATPSEPPTEISQQQQSQLQTVPSRKDPLTVSSPASQTKVKTNSLQYPPGYLGAVPDRKFSDWNNNDINAMGYLTGILSAKVYDVAEESPLQEATKLSQRLGVKIWLKREDLQPVFSFKLRGAYNMMAKLPKELLEKGVICSSAGNHAQGVALAAQKLGCSAVIVMPVTTPEIKWKSVEKLGATVVLVGDSYDEAQAYAKKRGKEEGRTFIPPFDHPDIIMGQGTVGMEIVRQMQGPLHAIFVPVGGGGLIAGIAAYVKQLCPEVKVIGVEPNDANAMALSLHHDQRVMLDKVGGFADGVAVKEVGEETFRICKKLIDGVVLVGRDSICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGLKGKHVVAITSGANMNFDKLRVVTELANVGRKQEALLATVMPEEPGSFKSFCELVGPMNITEFKYRYDSEKAAVVLYSVGVHTASELREMQERMQASKLQTYNLTKSDLVKDHLRYLMGGRSNLQNEVLCRFTFPERPGALMKFLDSFSPRWNISLFHYRGQGETGANVLVGIEIPRTEMDEFHDRADRLGYDYTVVTNNSVFQLLMH* | 679 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01134 | 678 | Gene3D | - | 198 | 476 | IPR036052 | - | |
Pte16g01134 | 678 | MobiDBLite | consensus disorder prediction | 114 | 150 | - | - | |
Pte16g01134 | 678 | ProSiteProfiles | ACT-like domain profile. | 598 | 669 | IPR001721 | - | |
Pte16g01134 | 678 | SUPERFAMILY | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 174 | 532 | IPR036052 | - | |
Pte16g01134 | 678 | Gene3D | Biosynthetic Threonine Deaminase; Domain 3 | 504 | 678 | IPR038110 | - | |
Pte16g01134 | 678 | CDD | ACT_ThrD-I_1 | 504 | 587 | - | - | |
Pte16g01134 | 678 | CDD | ACT_ThrD-I_2 | 597 | 677 | - | - | |
Pte16g01134 | 678 | SUPERFAMILY | ACT-like | 585 | 677 | IPR045865 | - | |
Pte16g01134 | 678 | Pfam | Pyridoxal-phosphate dependent enzyme | 194 | 482 | IPR001926 | - | |
Pte16g01134 | 678 | ProSiteProfiles | ACT-like domain profile. | 505 | 576 | IPR001721 | - | |
Pte16g01134 | 678 | CDD | Thr-dehyd | 185 | 486 | - | - | |
Pte16g01134 | 678 | Gene3D | - | 230 | 321 | IPR036052 | - | |
Pte16g01134 | 678 | FunFam | Threonine dehydratase | 504 | 678 | - | - | |
Pte16g01134 | 678 | MobiDBLite | consensus disorder prediction | 111 | 150 | - | - | |
Pte16g01134 | 678 | Pfam | C-terminal regulatory domain of Threonine dehydratase | 495 | 584 | IPR001721 | - | |
Pte16g01134 | 678 | Pfam | C-terminal regulatory domain of Threonine dehydratase | 590 | 675 | IPR001721 | - | |
Pte16g01134 | 678 | PANTHER | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED | 185 | 677 | - | - | |
Pte16g01134 | 678 | FunFam | L-threonine dehydratase | 296 | 476 | - | - | |
Pte16g01134 | 678 | NCBIfam | threonine ammonia-lyase, biosynthetic | 181 | 676 | IPR005787 | GO:0004794|GO:0009097 | |
Pte16g01134 | 678 | ProSitePatterns | Serine/threonine dehydratases pyridoxal-phosphate attachment site. | 218 | 231 | IPR000634 | GO:0006520|GO:0030170 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01134 | Pte-Chr16 | 30982847 | 30987988 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01134 | 2 | 73 | Eukaryotic Initiation Factors Gene Family | AT1G71770 | 37.975 | 8.47e-08 | 53.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01134 | K01754 | - | qsa:O6P43_009491 | 923.309 |