Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01131 ATGAGTAATGGGGATCAAGGGACTTCTTCGAGAGGTGGGAAGTCTACTGAAGACAAGGAGGGATCTGGAGATGTGAAATACAGAGGAGTACGTAGACGGCCATGGGGAAAGTATGCTGCTGAAATTCGAGACTCAACGAGGCATGGTGCAAGAGTTTGGCTTGGAACTTTTAACACAGCTGAGGAAGCAGCCAGGGCTTATGACAGAGCTGCTTACAACATGAGGGGTTCAATAGCCATTCTTAATTTCCCAGATGAATACCCGTTGACTACTGGGGGTGCTACTGCTTCTCATCAATCATCAAACTCTATGGCTTCTTCAACTTCTTCATCAAGTCGTCATGAGAATGCTGGAAGTGGTCATGAGAAACAGATCTTGGAAATAGAGTATTTGGATGACGAATTGTTGGAGGAACTTCTTGGATTTGAAGAGAAGCAAAAGAAAAAGGGAAAATAA 456 0.4408 MSNGDQGTSSRGGKSTEDKEGSGDVKYRGVRRRPWGKYAAEIRDSTRHGARVWLGTFNTAEEAARAYDRAAYNMRGSIAILNFPDEYPLTTGGATASHQSSNSMASSTSSSSRHENAGSGHEKQILEIEYLDDELLEELLGFEEKQKKKGK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01131 151 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 MobiDBLite consensus disorder prediction 92 115 - -
Pte16g01131 151 MobiDBLite consensus disorder prediction 12 30 - -
Pte16g01131 151 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 SUPERFAMILY DNA-binding domain 26 86 IPR016177 GO:0003677
Pte16g01131 151 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Pte16g01131 151 CDD AP2 26 85 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Pte16g01131 151 Gene3D AP2/ERF domain 25 85 IPR036955 GO:0003700|GO:0006355
Pte16g01131 151 MobiDBLite consensus disorder prediction 88 124 - -
Pte16g01131 151 MobiDBLite consensus disorder prediction 1 30 - -
Pte16g01131 151 PANTHER DNA-BINDING DOMAIN 16 145 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01131 Pte-Chr16 30881193 30882713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01131 26 147 AP2-EREBP Transcription Factor Family AT3G23230 55.738 4.75e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte16g01131 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01131 - - qsu:111996183 147.517