Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01122 | ATGGATTCCTGTGAGCATCTCGATCCTACTACGGTTAGCGATTCAGTTGGCGGGCATGTTGTGCAGCATTCAAGCTCTGAAATTCCCGAGCAGCCTGCTTTGTTGCAGAGGTTTTATTCGGAAGTAGGTCGCTCTTGCAATAATGATATGCTTGGTGGTCGCGACAAGAGCGAAGACACACCTGCTTGTGTGAGCCCTGCTGATGCGTTGGAGAAGTCTTCCATCAGTAATGATTGTTTGGTGGACGAATGTGAGAATGTTGGTAGGTCGGCGCCAGAGAAGGATGTATATAACGAATGCACCACGAGTGTGAGTGGGCAAGGTTGTAAGGGTGATTTTCGTAATTCAGGAAGCGGTGGGTTGTGTTTAGAGAAAGGAATTTCTCAAGGTGTGGTCCATGGCCAATTGTGCTCAGAGACTGTATCTACTTCAGGCTTGTTAAAAAATTCTGCTGTGTTAAACCAACAGAGGGATGATAGGAGCTACAAGGCCCCTCCTATGGAAGGATTTGCACCGATTATGGAAAACCTAAAAGATGATGATGATGCCAGCGACCTACCCAATGCCTACAACGAATCGTCTCCTTTATATAATTGTCAGATGCCATTAAAGTCACAGGCACTGGCTGATCTTCCTGGAGTTTCTCCCCAGCAAAATAAGCAGGAAGATGTTGAGAGAGCCCCTGATTCCTCTGGGTGTGTGGAAGATGAGCCAATATCTTTTAAAGGAATGGCGGCTTGCAAACATATCTTCCCTTCTCAGGATATTGAAGTTCCTTCAAGTTCATTTCATTCTGATTTTGAGAGTTTTCCTGATCTGTTGCATAACCAGAGCCATGGTCAGGGTAGCAGTAGTTCATTTAGAGATGGGAGCAGAGATGATGTTAATGTGGCAAGTGATATTTCTGTGTGTATCCCAACAATACAATTACATAGTTGTCAGGAGACAGTGGAGAATTCACTTGTAGCCGATTCACCTGTTCCAGAAGGCCCAATGAAGCTGAGAGATGACACGAGAGTTGTTGTTGACGTGGAAAATGATATTCCTGTGTGTATCTCAAAATCACAGTTGCTGAGTTGCCGGGAGATCGTGGATAATTCACATATAGCTGATACACCTGTTCAACAAGGCGTGAAGGAGTTGAGAGAGGACGCAAGAGTTCTTGTTGCATGTGTTGGCTCGGAATTAAAAGTTTTGGATCAGAATATCCTGGATTCTGATGCATATGTTGGAAACACAGGCAATTTGAAGGATAATGACTCAGAAACGACCACTGACTCCACGAGCAAAAGTCCATTTTCTCCTGAATCACTCAAAGCTTCTTTTTTAATCAACAATAGTTATTCAAAAGACATCCTTCATATCGCTAAAACTGAAGTAGGTACTATAAATTCAGGTGTTTTCAGTGCTTGTACTTATCAGATGGATGGCAATGGGGAAAATGATGTTTCAGTTGATGTTAGTGCTGGAAGCAAGTTTTCTGATACCGTAGCCTCAATTTCTCTTAGGAACAGTCGAAGAAGTAAAGATAGGTGTAAGATTCAGACAAAGAGGGCGTCCAGAAAGTGCATGAACAAAGCTAATCTAGGCAACAGTATGGACATCATTTTTGAGGCTGCTAGAAGAAAGAGAAGTAGTATCTCCAAGCCTGCTCGTTCTTCAGTGTGGGGTTCGCTTGGGAACGTAGAAGAGTTCTTTGAGCAGAGTAGCGGACCTCAGGTCAATCAATTGGTGTGTCCAGGATTGAGTAAGAAACATGGTCGGCGAAAGGGCAGGAATAAAGAGAATAACTCAAGTGTAAGATTGCAGGGACAGCAAAAATCCTTCTCAAACTTGCGGGTGCGATTGAAGGTCAAATTGGGTAAAGAACATAATCAAAGTTGTGTGAACATCACTGTTCCAGAGGTTGCTGATTCCTCAGTTGTTGCAAACAGCTCTATAACTGGTGCATGTTCTCAAAGAGGAACTAGTGTTGACAACAAAGATGCATTGGAGGGTTTTGGATTCATTGAGAAGAAACTTATGAAGGATGTGCATTCTGCAAATGGGAAGCTTGAAAGTAACCACTCAGATAGCACGGCAGTTGTCCAAAAATCATCTGGATGTGCCGAAGATCAAATAATTTCTTCTGAAAATGGTGTTGATGGTTTGGGAGAGGCAATCGATAGCAAGGGCATGGATCCTGGTACTTCACCAGATTCAGAAGTCATTAATGCAATTCCAGAAGTCCAAGTTGGAGAAAGAGAAGATGAAAATATGCATAATGCAGTTCTTAATTTGAAGGACTTCAGTTCTCCTACCGACGCCATGAGTGTTAAAAGAGGAAAGAAGAAAGACAAGCCCCCAAATAATTGTGTTATTGAAGATGGATCAACTGCTTCCAAATGTGCGAATAAGGGTAGGTCAAAAAAGAAATATGCTCGAAAAAAGAATAATAATGCTGACATAAATGTTGGTTCATCAATCAGTAAGGATCTGTCCATGGATTCTTCGCGCCATGTTAGAAAGCTTGAACTTGGATCAACCCCAGAAGGTTTTGAATATGGAAATGGCAGATCAGCAGAGGCAACTTGCTGCTTAGATGTTGGCGGTGGCTCGTTAATATCTGAAAGTCTGGAGCATACGCTGCCTTCTGCTTCTTCTTCACAACAAAAACTTACGAAAGATCAGAAATCAAGGAAAGTTGACAAGGGCCGATCTAGAACTTCTAACTCAGAGACAAGCAGGAAACAGGCGGCAGGAAAAAGCAGAAGAAAGCAGGGGAAATCAGTCATTAAGAATAAACTACCAAAGAACGATGCACATCAACAAGTGATGTGCAAAGCTGACAATCATCTGAATTCGGGAAATTGCCTTGATGGAAATCCATTGAGAAATTTTACTACTGCAAAAATTGATGCTGACCAGAAAAATCATAGTTTAAGCAACAATGATATGAACACTGTGTCTGACATTGGTTTGGAGGAGCAGGAGCCAGTACCCTATAAGGCTTGGGTGCGATGTGATGAATGTCACAAGTGGCGGCGCATTTCAACTGAACTTGCAGACTTAATTGAAGAAACAAATCGCACTTGGACCTGTAAGGACAGCTGCGATGGAGCGTTTGCCGATTGCTCCATTCCTCAGGAAAAGCCAAATGCAGATATCAATGCAGAGTTGGGACTGTCAGATGCTTCTGGTGAAGATGATGCTTATAATACCTGTAAAAATTACAGACAATTGGAATACAAGCCTCCAGTAGTGTCCCAGGAGTCAACTTTTACTCATATACTTACGAATGAATTTCTTCATCGCAGACGCAAAACTCAGACTATTGATGAGGTAATGGTGTGCCATTGTTCACCAAATCCAAGTGGTAAGCTGGGTTGTGGAGATGAATGTTTGAACCGGATGCTAAATATTGAATGTGTTGAAGAAACCTGCCCATGTGGAGACCTCTGTTCAAATCAACAGTTCCAGAAACACAATTATGCCAAATTGGAGTGGTTTAGATGTGGGAAGAAGGGTTATGGGTTGCAGGCTGTTGAGCATATATCCAAAGGGCGGTTTCTTATTGAGTATGTTGGAGAGGTGCTTGACATGCCTGCTTATGATGCGCGACAAAGAGAATATGCTTTGAAGGGTCACAGACATTTCTACTTCATGACCTTGGATGGCAGTGAGGTAATAGATGCAAGTGCAAAAGGAAATTTGGGGCGATTTATCAACCATAGTTGTGATCCTAATTGCCGTACAGAGAAGTGGATGGTGAACGGTGAAATTTGCATAGGCCTCTTTGCTTTGAGAGATATTAAAAAGGGTGAAGAAGTGACTTTCGACTACAATTATGTGAGAGTCTTTGGTGCTGCTGCAAAAAAGTGTTATTGTGGAGCATCCCGGTGTCGTGGTTACATAGGTGGTGATCTTCTTGATGCAGAAGTAATTGTTCAGGGTGATTCAGATGAAGAATTTCCAGAACCCGTGATGCTTAAAGAAGATGGCGAAATTGAAGACAAAGCCCTCGATGTCAAATTATCTGATGATACTAAGATGCAAGCATTTGGGCCTGAATCTAAGGAGATGAATGAGGTAGATGAATCCGCAATTGATGGTGGACAATGTCAGAGACATAGAGAAGGGAATTCCACAGACGGTGTTTATGCAGTCTCTGAATTACAAAGTTTGCTAAAATTAGAGGATTCTGACAGGAAGTTACCAGCATCTTTGGAAGTGGAAGCACCAATACGAATGGAAGATAGGGAGAACGTAGATAAACTTCCTGTTCAAAGTTTCACAGAGGATGATAACATAAAAAATTCCTCTTCCAACATTGAAGGATTTGGTATTTCTTTCCCAAATACTTCTCTTGGTAAAGAATTAATTGGTATTGTAAATAGTGCATCTGACTCTGACTTAGTTAAGAGCGAGCTAGTTTCTTCAAAATCAGGTCCACTTATGAAGAGTCGAGCAATCAGCCATGTAAAGAAGGAAAAAATTCGAAGTGCTACAAAATCTGAGAAAGTCAAGGTGACTGTTAATAAACTTCAATTATCATCTATCAAACAGAAAAGAGCGATGGAGGGTCCGAATAGCCGCTTTGAAGCAGTTGAGGGGAAACTTAACGAGTTACTGGATGAAGAAGGGGGCATAAGCAAAAGAAAAGATGCCACCAAAGGATACTTGAAGCTTTTGCTTCTTACTGCAGTATCTGGCGATAGCATGAATGGTGAAGCGATTCAAAGCAATCGAGACCTTTCAATGATCCTTGATGCCCTTCTGAAAACAAAGTCACGTACTGTACTGAATGATATAATCAACAAAAACGGATTGAGGATGTTGCACAACATAATGAAGAAGTACAGGCGGGACTTCAACAAGACACCAATACTCCGGAAACTTCTCAAGATTTTAGAGTACATGGCCGCACGCAACATACTAACATCTGAGCACATCAATGGCCTGGCTCCTTGTGCTGAAATGGAGAGCTTTGGGGACTCAATTCTGTCACTGACGGAGCATGATGATAGACAGGTTCATCAAATTGCTAGAAGCTTTCGAGACAAATGGATAAGACCTTTCAGAAATAGGGAGATCAGTGGATCAGAATCCCAGAGGAGTTGCAATTCTAATAGATCCTTGCCTGCTAACAACTATAGGCGGGATCAGGATGTGAGATTCACAGAGACTTATGGTGCTCAGTCAATGCTTCCAACAACTTCAACGGATACAAGTGCCCAATCTAGTTGCTTGGCACCTGCAACTGATGGTTCTGAAAGTAACACAACAAGAAGACGCAAGCGTAAAAGCCGATGGGATCAGCCAACTGAAACAAATTCAAATCCATTACCTCATCAGAAAGTTGACTATTTGCAGCTAAATCAAGTTAACTGCTTTCAGCAAGATGCTCCTACCAAGTTTGACAATGAAAAGATGGACGTTTCTGATGATGTTCCTCCTGGTTTTTCTTCTCCTGTCCATCCCCATTTGAGTTCATTTCATGTTTCATCGAATGACAAAGATCACAGTGGTCACAATGATTGGCACTCTCCGAATCGTTCTACAGTTCTGGGGCATTTACAGGAGAAATTTCTTTCTCGCTTGCCTGTCTCTTATGGAATTCCTGTATCTACTGTACAACAATATGGCACGCCAGAATCTAAAGTTGCTGATGGTTGGGCCATTGCTCCATCAATGCCGTTTAGTCCTTTTCCTCCCTTACCTCCATATCCAAGGGAGAAGAGAAAACACTCCCCTTCACAAGCAACTCAACCTGTCATGATGAATTATCCAGCTGAAGTGAGAAATCGGGGAGCCTATAACACAGCCAGTTGTTACTCTGGGGAGTCCACTCCAAGTGCAATGGGCCCTAATAATCAAAATGTGGATCGGTGGTATGGGAACCTTGATTCACACAAACGAGTAAAAGGTTCGTCTAATGATTTGGGAAGAAGATACTATAGGCAGCAAAAGTGGAATAATGCAAAACAAGTTGCCCCTTGGATACGCAATGGAACTGCTTGGGGAGGCAATCGAAACAACAGTTCAAGGGGTGGAATGTGTAGTACAGGTGTAGGAGATGCTCCCAATGACCCTAGAACTTCGAATTGTTCTAAGTTGGGGAGAGCTGGTAATAATGGCTATCCCCATACACAGCAACAAAACGAATACTGA | 6150 | 0.4236 | MDSCEHLDPTTVSDSVGGHVVQHSSSEIPEQPALLQRFYSEVGRSCNNDMLGGRDKSEDTPACVSPADALEKSSISNDCLVDECENVGRSAPEKDVYNECTTSVSGQGCKGDFRNSGSGGLCLEKGISQGVVHGQLCSETVSTSGLLKNSAVLNQQRDDRSYKAPPMEGFAPIMENLKDDDDASDLPNAYNESSPLYNCQMPLKSQALADLPGVSPQQNKQEDVERAPDSSGCVEDEPISFKGMAACKHIFPSQDIEVPSSSFHSDFESFPDLLHNQSHGQGSSSSFRDGSRDDVNVASDISVCIPTIQLHSCQETVENSLVADSPVPEGPMKLRDDTRVVVDVENDIPVCISKSQLLSCREIVDNSHIADTPVQQGVKELREDARVLVACVGSELKVLDQNILDSDAYVGNTGNLKDNDSETTTDSTSKSPFSPESLKASFLINNSYSKDILHIAKTEVGTINSGVFSACTYQMDGNGENDVSVDVSAGSKFSDTVASISLRNSRRSKDRCKIQTKRASRKCMNKANLGNSMDIIFEAARRKRSSISKPARSSVWGSLGNVEEFFEQSSGPQVNQLVCPGLSKKHGRRKGRNKENNSSVRLQGQQKSFSNLRVRLKVKLGKEHNQSCVNITVPEVADSSVVANSSITGACSQRGTSVDNKDALEGFGFIEKKLMKDVHSANGKLESNHSDSTAVVQKSSGCAEDQIISSENGVDGLGEAIDSKGMDPGTSPDSEVINAIPEVQVGEREDENMHNAVLNLKDFSSPTDAMSVKRGKKKDKPPNNCVIEDGSTASKCANKGRSKKKYARKKNNNADINVGSSISKDLSMDSSRHVRKLELGSTPEGFEYGNGRSAEATCCLDVGGGSLISESLEHTLPSASSSQQKLTKDQKSRKVDKGRSRTSNSETSRKQAAGKSRRKQGKSVIKNKLPKNDAHQQVMCKADNHLNSGNCLDGNPLRNFTTAKIDADQKNHSLSNNDMNTVSDIGLEEQEPVPYKAWVRCDECHKWRRISTELADLIEETNRTWTCKDSCDGAFADCSIPQEKPNADINAELGLSDASGEDDAYNTCKNYRQLEYKPPVVSQESTFTHILTNEFLHRRRKTQTIDEVMVCHCSPNPSGKLGCGDECLNRMLNIECVEETCPCGDLCSNQQFQKHNYAKLEWFRCGKKGYGLQAVEHISKGRFLIEYVGEVLDMPAYDARQREYALKGHRHFYFMTLDGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKGEEVTFDYNYVRVFGAAAKKCYCGASRCRGYIGGDLLDAEVIVQGDSDEEFPEPVMLKEDGEIEDKALDVKLSDDTKMQAFGPESKEMNEVDESAIDGGQCQRHREGNSTDGVYAVSELQSLLKLEDSDRKLPASLEVEAPIRMEDRENVDKLPVQSFTEDDNIKNSSSNIEGFGISFPNTSLGKELIGIVNSASDSDLVKSELVSSKSGPLMKSRAISHVKKEKIRSATKSEKVKVTVNKLQLSSIKQKRAMEGPNSRFEAVEGKLNELLDEEGGISKRKDATKGYLKLLLLTAVSGDSMNGEAIQSNRDLSMILDALLKTKSRTVLNDIINKNGLRMLHNIMKKYRRDFNKTPILRKLLKILEYMAARNILTSEHINGLAPCAEMESFGDSILSLTEHDDRQVHQIARSFRDKWIRPFRNREISGSESQRSCNSNRSLPANNYRRDQDVRFTETYGAQSMLPTTSTDTSAQSSCLAPATDGSESNTTRRRKRKSRWDQPTETNSNPLPHQKVDYLQLNQVNCFQQDAPTKFDNEKMDVSDDVPPGFSSPVHPHLSSFHVSSNDKDHSGHNDWHSPNRSTVLGHLQEKFLSRLPVSYGIPVSTVQQYGTPESKVADGWAIAPSMPFSPFPPLPPYPREKRKHSPSQATQPVMMNYPAEVRNRGAYNTASCYSGESTPSAMGPNNQNVDRWYGNLDSHKRVKGSSNDLGRRYYRQQKWNNAKQVAPWIRNGTAWGGNRNNSSRGGMCSTGVGDAPNDPRTSNCSKLGRAGNNGYPHTQQQNEY* | 2050 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01122 | 2049 | PANTHER | SET DOMAIN PROTEINS | 531 | 1770 | - | - | |
Pte16g01122 | 2049 | Gene3D | SET domain | 1056 | 1307 | IPR046341 | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 583 | 604 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1693 | 1778 | - | - | |
Pte16g01122 | 2049 | ProSiteProfiles | AWS domain profile. | 1106 | 1156 | IPR006560 | GO:0005634|GO:0042054 | |
Pte16g01122 | 2049 | Pfam | AWS domain | 1121 | 1155 | IPR006560 | GO:0005634|GO:0042054 | |
Pte16g01122 | 2049 | ProSiteProfiles | Zinc finger CW-type profile. | 992 | 1046 | IPR011124 | GO:0008270 | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1995 | 2049 | - | - | |
Pte16g01122 | 2049 | ProSiteProfiles | Post-SET domain profile. | 1283 | 1299 | IPR003616 | - | |
Pte16g01122 | 2049 | Pfam | CW-type Zinc Finger | 998 | 1044 | IPR011124 | GO:0008270 | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Pte16g01122 | 2049 | Pfam | SET domain | 1169 | 1275 | IPR001214 | GO:0005515 | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 876 | 933 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 887 | 904 | - | - | |
Pte16g01122 | 2049 | SUPERFAMILY | SET domain | 1086 | 1296 | IPR046341 | - | |
Pte16g01122 | 2049 | SMART | set_7 | 1158 | 1281 | IPR001214 | GO:0005515 | |
Pte16g01122 | 2049 | SMART | shorttest3 | 1106 | 1157 | IPR006560 | GO:0005634|GO:0042054 | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1999 | 2013 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 762 | 808 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 2020 | 2049 | - | - | |
Pte16g01122 | 2049 | Gene3D | - | 996 | 1055 | - | - | |
Pte16g01122 | 2049 | ProSiteProfiles | SET domain profile. | 1158 | 1275 | IPR001214 | GO:0005515 | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1720 | 1751 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 410 | 434 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 213 | 235 | - | - | |
Pte16g01122 | 2049 | MobiDBLite | consensus disorder prediction | 1693 | 1710 | - | - | |
Pte16g01122 | 2049 | FunFam | Histone-lysine N-methyltransferase | 1057 | 1313 | - | - | |
Pte16g01122 | 2049 | SMART | PostSET_3 | 1283 | 1299 | IPR003616 | - | |
Pte16g01122 | 2049 | CDD | SET_SETD2 | 1157 | 1299 | IPR044437 | GO:0010452|GO:0046975 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01122 | Pte-Chr16 | 30759190 | 30771018 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01122 | 1141 | 1298 | C2H2 Transcription Factor Family | AT2G23740 | 36.612 | 2.58e-23 | 106 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Pte16g01122 | SET | 7.3e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01122 | - | - | qsa:O6P43_019792 | 1443.71 |