Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01120 ATGGAATTTCAACAGAGAAAAGGTTTGCTTGGCTCAGTTCACTGGAAATTCAGCAAGAATTCCAAAGTGACAAACAATGAGGGCACTGCTCAGAATTTGAAGAAGAGTTTAGCTGAGACTATTCTGGATTCAACAGAGAACATTGAGAAACAGAAATGCTCAGTCTGTTCTGTAACTGCTGAACTAACTGACACTTCTAGTGAGCAATCTGTGCAAGATTATTCAGGTAACCGTGACGAGGACAACTCTCTGGCTATAGTGCCAGTTTATCCGGCAGAAACAACGTCAAATTCAAATCCAATGTCAATCATAGCAGTGCCAGAATCAAAACCTGGTTGGCCTCTTCTGCGGCGCGTAATCTCATCAAACCAACAGGCTTCTGATAGGTCATTGTTGAGGCAATTGTCAGTAGTTCAATGGGCAATGCGGTTACCCTGTAGAGATCTTCCACAGACTGCAGAGTCTATTAACAAGGGATATGGTAATGATCATCAGAGTCAGGAACCAAGTGGCTGTTTAGATGGTGAAAGCGGTGCCATAGTTCTAATGGATGCTGGGATAGGGACTAGCCCACGTTCCTCAGATCCCTGTTTGAATAGAATTCCAAAAGAACTGGAAGAGCTTTGTGAGAAATATTCTTCTTCATGCAGATTATTTAGCTACCAAGACCTTGTAGTGGCCACATCAAATTTCTTGGCAGAAAACTTGATAGGAAAAGGTGGGAGCAGCCAGGTTTACAGAGGCTGCCTTTTAGATGAGAAGGAGCTTGCCGTGAAGATCTTAAAGCCTTCTGAGGATGCTTTAAAGGAGTTTCTCTTGGAAATAGAGATTATCACTACTATAAATCACAAAAATATCATTTCACTCATTGGCTTCTGTTTCGAGGATGGACATCTTCTGTTGGTGTATGATCTGTTGTCAAGGGGAAGCCTCGAAGAGAACCTTCATGGTTCAAAAAGAGATCCTCTTGCATTTAGATGGACAGAGAGATTTAGAGTTGCACTAGGGGTAGCAGATGCTTTAGATTATCTGCACAACCATGTTCAACCTGTGATTCACAGGGATGTCAAATCGTCAAACATATTGTTATCAGATGATTTTGAACCTCAGCTTTCTGATTTTGGACTGGCTACATGGGCATCAGCTACTTCCTCTCATATAACCTGCAGCGATGTTGCTGGAACATTCGGTTACCTGGCACCTGAATACTTCATGTATGGAAAAGTGAATGAAAAAATTGATGTCTATTCATTCGGTGTGGTGCTCCTGGAGCTACTCTCTGGAAAAAAACCAATAAGCAGTGATTTGCCTAAAGGCCGGGAGAGCCTAGTGATGTGGGCAACCCCGATTCTAAATTGTGGAAAAGTATCTCAATTATTAGATCCAAGCTTGGATAACACGTATGATCAGGACCAGATGGAGAGAATGGTCTTGGCAGCTACCCTTTGTATTAGACGTGCACCGCGAGCTAGGCCTCATATGACCACGGTGCTAAAGCTCCTTCAAGGTGACAATGATGTCCTCAAGTGGGCAAGGCTAGAAGTTAATGCTTCTGAGACACCAGATTTCCCAGATGATGAGACTAGTCATGGTTCTAATCTTCAATCACATCTTAACCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGAGCAGCATGGAGCAGAACGTGTCCTTGGAGGATTATTTGAGAGGCAGGTGGAGCCGTTCTTCAAGCTTTGACTAA 1731 0.4327 MEFQQRKGLLGSVHWKFSKNSKVTNNEGTAQNLKKSLAETILDSTENIEKQKCSVCSVTAELTDTSSEQSVQDYSGNRDEDNSLAIVPVYPAETTSNSNPMSIIAVPESKPGWPLLRRVISSNQQASDRSLLRQLSVVQWAMRLPCRDLPQTAESINKGYGNDHQSQEPSGCLDGESGAIVLMDAGIGTSPRSSDPCLNRIPKELEELCEKYSSSCRLFSYQDLVVATSNFLAENLIGKGGSSQVYRGCLLDEKELAVKILKPSEDALKEFLLEIEIITTINHKNIISLIGFCFEDGHLLLVYDLLSRGSLEENLHGSKRDPLAFRWTERFRVALGVADALDYLHNHVQPVIHRDVKSSNILLSDDFEPQLSDFGLATWASATSSHITCSDVAGTFGYLAPEYFMYGKVNEKIDVYSFGVVLLELLSGKKPISSDLPKGRESLVMWATPILNCGKVSQLLDPSLDNTYDQDQMERMVLAATLCIRRAPRARPHMTTVLKLLQGDNDVLKWARLEVNASETPDFPDDETSHGSNLQSHLNLALLDVEDDSLSMSSMEQNVSLEDYLRGRWSRSSSFD* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01120 576 SMART serkin_6 231 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01120 576 PANTHER OS08G0249100 PROTEIN 34 512 IPR046958 -
Pte16g01120 576 SUPERFAMILY Protein kinase-like (PK-like) 212 512 IPR011009 -
Pte16g01120 576 Gene3D Transferase(Phosphotransferase) domain 1 306 515 - -
Pte16g01120 576 ProSiteProfiles Protein kinase domain profile. 231 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01120 576 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 200 305 - -
Pte16g01120 576 Pfam Protein kinase domain 234 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01120 576 Gene3D Phosphorylase Kinase; domain 1 197 305 - -
Pte16g01120 576 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Pte16g01120 576 FunFam Putative receptor-like serine/threonine-protein kinase 306 517 - -
Pte16g01120 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01120 Pte-Chr16 30746699 30749590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01120 219 507 Trihelix Transcription Factor Family AT1G70460 43.729 3.42e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte16g01120 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01120 - - qsa:O6P43_019794 772.696