Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01106 ATGTCATTAGTTAGGCCTGTAGAATTAGCTGCTACTTCATATGGGAATGCGAAGCTTTACTCTCTAAAGGGAACTGATGGGTGCACTGGGATGGCCTCTCAGATGTTTGGCTCTGGAAAGCACAGGGCCATGTGTACAACAGATTCCTATAGTAGTGAGAATTTCGAGAAGTACTTTCATGACTCGCCAACAGAAGAGTTAGTACAACTATCCAGTTCTAGCATCTCAGCAAATTCCTTTGGCCCTGAGGTCAAGTCCTCCTACCTACCTAGAGCTGGTTCAAATAACCTTTGTCTGAATGCATTTGACACAACTATGAGACACCACAAGGCATATCAATCTAACTCTGAATCTGATTATTTGCAAATTCATAGCCCTGATCTACTGGATTTCAATGATCAGACGAGATTGAAACTCCAAGAACTTGAAAGGGCACTGCTTGAGGATAACGATAATGAAGATGATGAGGATGAAATATTTGAGGCTGGTCAAGTCATGGACGTCGATGGTGAATGGACTGACCTTACTCACAATGCTCATCTCCATGATTCACCGAAGGAGTCGTCATCTTCAGATTCCAACCATAGTAGCATCAGTATCAACAAAGAAATTTCACAATTCTCTCCTCAGACTCCCAAGCAATTGCTTTTTGACTGTGCAGCTGCACTTTCCGAGGGACACATAGAGGAAGCATCATCTATGATAAATGAACTTAGGCAGATGGTCTCAGTTCAAGGTGACCCCTCTTCTAGGATTGCAGCCTACATGGTGGAAGGTCTTGCTGCTCGCATGGCACTGTCCGGTAAATTTCTCTATAAGGCACTCAGGTGCAAAGAACCTCCCTCTTCAGACCGTCTTGCAGCCATGCAAATACTGTTCGAGGTATGCCCTTGTTTCAAATTTGGATATGTTGCAGCAAATACTGCAATCCTAGAGGCAATAAAAGATGAAAAGAGGGTTCATATTGTTGATTTCGACATAAACCAAGGAAGTCAATACATAGCATTGCTACAAGCACTTGCAGCAAGACCAGGTAAGCGGCCCCATTTGAGACTAACTGGAGTGGATGATCCTGAATCTGTTCAACGTTCTGTCGGAGGTCTGAAAATTATAGGGCAGAGGCTTGAAAAGCTTGCAGAAGCATTCAGATTGCCATTTGAATTTCGAGCTCTGCCGTCATCGACTTCACTTGTCAAACCAGCTATGCTTGAGTATCGTCCTGGGGAGGCCCTTATTGTGAACTTTGCTTTCCAGCTTCATCATATGCCAGATGAGAGCGTTTCGACAGTGAATGAAAGAGACAAACTTCTCAGAATGGTGAAGAGCCTCAAACCGAAACTTGTCACAGTTGTGGAGCAAGACATGAACACTAACACAACACCTTTCTTCCCAAGATTTGTAGAAGCATATAATTACTATTCTACAGTGTTTGAATCATTGGATGCAACTCTTCCAAGGGAAAGTCAGGATAGGGTGAATGTGGAGAGGCAGTGCCTCGCCAGGGACATTGTTAACATTGTTGCATGTGAAGGGGAGGAAAGAATAGAAAGGTACGAGGTTGCAGGAAAGTGGAGAGCAAGGATGGCAATGGCTGGCTTCACTTCACGTCCAATGGGGCCAACAGTGATTGATGTGATAAGGAAACTCATAAAACAGTATTGTGATAGGTACACAGTGAAGGAGGAGATGGCAGGCCTTCATTTTGGGTGGGATGACAAGACCTTGATAGTTGCATCAGCATGGAGGTGA 1749 0.4414 MSLVRPVELAATSYGNAKLYSLKGTDGCTGMASQMFGSGKHRAMCTTDSYSSENFEKYFHDSPTEELVQLSSSSISANSFGPEVKSSYLPRAGSNNLCLNAFDTTMRHHKAYQSNSESDYLQIHSPDLLDFNDQTRLKLQELERALLEDNDNEDDEDEIFEAGQVMDVDGEWTDLTHNAHLHDSPKESSSSDSNHSSISINKEISQFSPQTPKQLLFDCAAALSEGHIEEASSMINELRQMVSVQGDPSSRIAAYMVEGLAARMALSGKFLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGYVAANTAILEAIKDEKRVHIVDFDINQGSQYIALLQALAARPGKRPHLRLTGVDDPESVQRSVGGLKIIGQRLEKLAEAFRLPFEFRALPSSTSLVKPAMLEYRPGEALIVNFAFQLHHMPDESVSTVNERDKLLRMVKSLKPKLVTVVEQDMNTNTTPFFPRFVEAYNYYSTVFESLDATLPRESQDRVNVERQCLARDIVNIVACEGEERIERYEVAGKWRARMAMAGFTSRPMGPTVIDVIRKLIKQYCDRYTVKEEMAGLHFGWDDKTLIVASAWR* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01106 582 Pfam GRAS domain family 213 582 IPR005202 -
Pte16g01106 582 Coils Coil 132 152 - -
Pte16g01106 582 MobiDBLite consensus disorder prediction 178 197 - -
Pte16g01106 582 ProSiteProfiles GRAS family profile. 203 582 IPR005202 -
Pte16g01106 582 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 577 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01106 Pte-Chr16 30580797 30585091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01106 1 583 GRAS Transcription Factor Family AT1G21450 61.149 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte16g01106 GRAS 1.6e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01106 - - cave:132184486 824.698