Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01103 ATGGTACCTCAGGGGCCACCCACTCCCATAGGTGGTACCCAATCTGTGCCATCTTCACTTTTGAGATCAAGTTCTGGATTAATGGGAGGTCAAGGGGGGGCATTCTCATCACAAAGTGGTTTCCCTTCCCTTGTGTCTCCACGTACTCATTTCAATAACATGAATGTGCTTGGCAATGTACCCAATATGTCTTCCATACTAAATCAACCTTTTGCAAGTGGGGTTCCAAATCCTGGTCTCTCTGGTCCTGGTAGTAGCCAGCGCAGTGCAGAAGCAGGAGCTGAATCAGATCCACTCGCTGCTGTTGGCAACGCTATGGGTTTTGCTAACTCCTCATCCTTTGGAGCTACAAATTTGGTAAACCCTGGCCCATCTGGTCAGCCTCAAGGTCAGCAGTTCTCAAACTCTTCAGGCAACCAGTTGTTGCCTGATCAACAGCAAGCTCAACAGCTCGAACCTCAAAATTTCCAGCATAATCAGCAGTCAGTTGAACAGTTCAGCGCACCACACAGCACTCATCAGCAGCAGCAACAGCATTTTCAAACAATTCGAGGTGGAATGGGTGGTGTTAGACCTGTCAAGTTGGAGGTTAACAATGATCAACTTGGTCAGCAGCAGCAGGTGCAAGCGATGAGGAATTTTGCTTCAGTGAAATTGGAACCTCATCAAATGCAGACAATGAGAAATATGGCTCCAGTAAAAATGGAACCCCAACATTCTGACCAATCATTATTTTTGCATCAACAGCAGCAGCACCATCAGCAACAGCAGCAGCAGCAATTACTAAATATGTCAAGGCAGCCTTCCCAGCCTACTGCTGCACAATTTAATCTGTTACAACAGCAAAGGTTTCTTCATCTCCAACAACAGCAACAACAACAGCTCCTGAAAACAATGCCTCAACAAAGATCGCCATTGCCCCAGCAGTTTCAACAGCAAAACTTGTCTCTAAGGTCTCCAGTAAAACCTGCTTATGAACCTGGAACTTGTGCTCGACGCCTGACACATTATATGTACCAGCAGCAACACAGGCCTGAGGATAACAATATTGAATTTTGGAGAAAATTTGTTGCTGAGTACTTTGCTCCTCATGCAAAAAAGAAGTGGTGTGTTTCCATGTATGGCAGTAGCAGACAAACACCTGGAGTATTTCCTCAGGATGTCTGGCACTGTGAAATATGTAATCGCAAGCCTGGACGTGGTTTCGAGGCAACTGTTGAGGTGCTTCCCAGGCTCTTTAAAATCAAGTACGAAAGTGGCACTTTAGAAGAGCTGCTTTATGTTGATATGCCTCGTGAATATCAGAATTCATCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAGAGTGTCTTTGAGCAGCTTCGTGTTGTTCGTGATGGGCAACTTCGGATAGTTTTCTCACCAGACCTGAAGATTTGCTCATGGGAATTCTGTGCTCGACGTCATGAAGAGTTAATACCTAGGAGATTGCTGATACCCCAGGTTGGTCAGCTTGGAGCTGCAGCTCAAAAATACCAGGCTGCCACTCAGAATGCATCTTCTAATTTATCTGTTCCTGATTTACAAAACAATTGTAATATGTTTGTTGCATCAGCACGGCAGTTAGCAAAAGCTCTCGAAGTGCCACTCGTCAATGATTTGGGGTACACCAAACGATATGTACGGTGCTTGCAGATTTCAGAAGTTGTAAACAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGGGACGGGTCCTATGGAGAGTTTGGCCAAATTTCCTAGGAGGACTGCTACCTCTGCTGGATTTCACAGCCAGATTCAACAAGAGGATCGGTTGCAGCAACAGCAGATGATAGCACAAAATTCTGGCAACGATCAGAACTCTGTCCAGGGTGGTGCAATGCAAATTATCTCTAATAATGGTGTGGCTGGTGTAAATATCTCGGGTACCTCTGCATCTACATCAACTACCACTAGCACTATTGTGGGCCTTCTTCACCAAAATTCTATGAACTCCAGACATCAAACTCCCACGAATAATGCAAATAGTCCATATGGTGGAAGCTCTGTTCAAGTTCCATCCCCAGGTTCATCCAGCACAATGTCCCATGCGCAGCCAAACCCTTCTCCTTTTCAACCGCAGACGCCGTTATCATCATCGAACCACCCTCCACAAACATCCCATGCTGCCTTGCCATCATCTGCAAATCACATGAGCACCACTAATTCACCAGCAAATATTTCAATGCAACAACAATCTCTTTCTAGTGAACCTGATCCAAGTGATTCCCAGAGCTCTGTTCAAAAAATCCTGCATGAAATGATGATGTCTAGCCAACTAAATGGCTCTACAGGAGGAATGATGGGTGTTGGTTCAATTGGTAGTGACATGAAGAATATCAATGGGGTTGTGTCAGCAAATGCAAACTCAGGCCTCAACAATGTCAATGGCTTGGTAGGGAATGGGACTACACACAACACATCGAGTGTAGTTGGTTCAGGGTTTGGTGCAATGGGTGGTGGAGTAGCGCAATCTGCCATGGTCAATGGAATTAGAACTGCAATGGGAAATAATGCAGTCATGAATGGTAGGGTAGGGATGGCTTCTTTGCTTCGGGATCAAGGTATGCATCATCAACAGGATTTGTCAAATCAACTGCTCAATGGTCTAGGAGCGGTTAATGGTTTTAGTAATCTTCAATACGATTGGAAAGCATCACCATAA 2718 0.4489 MVPQGPPTPIGGTQSVPSSLLRSSSGLMGGQGGAFSSQSGFPSLVSPRTHFNNMNVLGNVPNMSSILNQPFASGVPNPGLSGPGSSQRSAEAGAESDPLAAVGNAMGFANSSSFGATNLVNPGPSGQPQGQQFSNSSGNQLLPDQQQAQQLEPQNFQHNQQSVEQFSAPHSTHQQQQQHFQTIRGGMGGVRPVKLEVNNDQLGQQQQVQAMRNFASVKLEPHQMQTMRNMAPVKMEPQHSDQSLFLHQQQQHHQQQQQQQLLNMSRQPSQPTAAQFNLLQQQRFLHLQQQQQQQLLKTMPQQRSPLPQQFQQQNLSLRSPVKPAYEPGTCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGSSRQTPGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVGQLGAAAQKYQAATQNASSNLSVPDLQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTATSAGFHSQIQQEDRLQQQQMIAQNSGNDQNSVQGGAMQIISNNGVAGVNISGTSASTSTTTSTIVGLLHQNSMNSRHQTPTNNANSPYGGSSVQVPSPGSSSTMSHAQPNPSPFQPQTPLSSSNHPPQTSHAALPSSANHMSTTNSPANISMQQQSLSSEPDPSDSQSSVQKILHEMMMSSQLNGSTGGMMGVGSIGSDMKNINGVVSANANSGLNNVNGLVGNGTTHNTSSVVGSGFGAMGGGVAQSAMVNGIRTAMGNNAVMNGRVGMASLLRDQGMHHQQDLSNQLLNGLGAVNGFSNLQYDWKASP* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01103 905 MobiDBLite consensus disorder prediction 8 41 - -
Pte16g01103 905 MobiDBLite consensus disorder prediction 668 765 - -
Pte16g01103 905 PANTHER LIM DOMAIN-BINDING PROTEIN 39 894 IPR029005 -
Pte16g01103 905 MobiDBLite consensus disorder prediction 69 92 - -
Pte16g01103 905 MobiDBLite consensus disorder prediction 157 177 - -
Pte16g01103 905 MobiDBLite consensus disorder prediction 1 41 - -
Pte16g01103 905 Pfam LIM-domain binding protein 333 587 IPR029005 -
Pte16g01103 905 MobiDBLite consensus disorder prediction 69 96 - -
Pte16g01103 905 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01103 Pte-Chr16 30559700 30564935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01103 1 903 C2H2 Transcription Factor Family AT1G43850 60.106 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01103 - - qsa:O6P43_015080 1198.34