Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01100 ATGTCAAGCACGACAGTTGGTCAGATCATCCGATGCAAAGCTGCTGTGGCTTGGGAAGCTGGAAAGCCACTGGTGATTGAAGAAGTTGAGGTGGCCCCTCCCCAGGCAAACGAAGTTCGCATGAAAATCCTCTATACTGCTCTTTGTCATAGTGATGTCTACTTCTGGGAAGCCAAGGGCCAAGACCCCTTATTCCCCAGAATCTATGGTCACGAAGCAGGAGGGATTGTGGAAAGTGTTGGTGAGGGGGTGACTGATCTGAAAGCAGGAGATCATGTCTTGCCTGTTTTCACGGGGGAGTGCAAGGAATGCCGTCACTGCAAATCAGAGGACAGCAATATGTGCGACCTGCTTAGAGTAAACATAGAGAGAGGGGTGATGATCCAAGATGGGAAGTCAAGATTTTCAATCAACGGCAAGCCCATATACTGTTTTCTAGGGACCTCCACCTTCAGTGAGTACACCGTCGTCCATGCTGGATGTGTTGCCAAGATCAATCCCTCTGCTCCTCTTGACAAAGTCTGCGTTCTCAGCTGTGGTTTTTCCACAGGCTTTGGTGCAACTGTGAATGTCGCTAAACCAGCAAAGGGATCTACTGTGGCTGTGTTTGGATTAGGAGCTGTTGGTCTTGCAGCTGCTGAGGGTGCTAGAGTTTCACAAGCTTCAAGGATCATTGGCGTGGACATCAATCCAAACCGATTTGAGAAAGCAAAACAATTCGGGGTGACCGAATTTGTGAACCCAAGAGATCATGACAAGCCAGTTCAGCAGGTTATTGCTGAAATGACTGATGGAGGAGTGGATAGAAGCATCGAATGTACTGGAAATGTGGATGCCATGGTTTCTGCATTTGAATGCGTCCATGATGGTTGGGGTGTTGCTGTACTTGTGGGAGTGGCAAAGAAAGATGCTGTGTTTAAAACTCATCCTATGAATCTATTGAATGAGAGGACACTGAAAGGCACCTTCTTTGGAAACTTCAAGCCCCGTACGGATCTTCCTGCTTTAGTAGAGAGGTACATGAACAAGGAAATTGAACTGGAAAAGTTTATTACCCACCAATTGCCATTCTCAGAGATCAACAAGTCCTTCGAATACATGCTGAATGGAGAGAGCCTTCGATGCGTCATTAGCATGCAAGAAGGCTAG 1149 0.4717 MSSTTVGQIIRCKAAVAWEAGKPLVIEEVEVAPPQANEVRMKILYTALCHSDVYFWEAKGQDPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECRHCKSEDSNMCDLLRVNIERGVMIQDGKSRFSINGKPIYCFLGTSTFSEYTVVHAGCVAKINPSAPLDKVCVLSCGFSTGFGATVNVAKPAKGSTVAVFGLGAVGLAAAEGARVSQASRIIGVDINPNRFEKAKQFGVTEFVNPRDHDKPVQQVIAEMTDGGVDRSIECTGNVDAMVSAFECVHDGWGVAVLVGVAKKDAVFKTHPMNLLNERTLKGTFFGNFKPRTDLPALVERYMNKEIELEKFITHQLPFSEINKSFEYMLNGESLRCVISMQEG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01100 382 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 343 IPR036291 -
Pte16g01100 382 FunFam Alcohol dehydrogenase class-P 184 322 - -
Pte16g01100 382 PANTHER ALCOHOL DEHYDROGENASE 7 377 - -
Pte16g01100 382 SUPERFAMILY GroES-like 329 377 IPR011032 -
Pte16g01100 382 FunFam alcohol dehydrogenase 1-like isoform X1 20 183 - -
Pte16g01100 382 Gene3D - 20 371 - -
Pte16g01100 382 Pfam Alcohol dehydrogenase GroES-like domain 37 164 IPR013154 -
Pte16g01100 382 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Pte16g01100 382 SUPERFAMILY GroES-like 5 186 IPR011032 -
Pte16g01100 382 CDD alcohol_DH_plants 10 377 - -
Pte16g01100 382 Gene3D - 184 322 - -
Pte16g01100 382 Pfam Zinc-binding dehydrogenase 207 338 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01100 Pte-Chr16 30489987 30492852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01100 37 380 Monolignol Biosynthesis Gene Families AT1G72680 26.479 6.49e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01100 K18857 - cit:102616565 663.299