Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01093 ATGGAGTGCAACAAAGATGAAGCAGTTAGGGCTAGAGAAATCGCTGTGAGGAAATTTACAGAAAGGGATTATGCCAGTGCGAAGAAATTTGCTCTCAAGGCCCAGAATTTATTTGCTGATTTGGAGGGTATTTCCCAATTTTTGACGACTCTCGATATTTACATCTCCTCAGAGATTAAAGTAAGTGGTGAGATTGATTGGTATGGCATACTTGGTGTGAGTCCTTTTGCTGATGATGACACTATTAGGAAACAGTACAGGAAGTTGGCACTCAATCTGCACCCTGATAAAAACAAGTCTGTAGGTGCAGAGGGTGCATTCAAGTTGGTTTCAGAGGCCTGGAGTTTGTTGTCTGATAAATCTAAAAGATTAATGTACAATCAGAAGAGAAGTGTGAAGATACCTTCGCAGAACCGTCAAATGTACAGCAGATCCCAGACAGCAGCTTCCAATTCAAACGGTTATCATAATTTCTCCAGTAATGTACCTTCAAGTACAAGGACAACAGATAGCTCAAGATCAGGTGTCTCCTCGGTTCCTCCTCAATTTAAAAGACCGGACACGTTTTGGACTGTTTGTAACAGGTGTAAGACACATTATGAGTACCTCAGGGTTTATCTAAATCACACACTTCTTTGCCCTAATTGTAGTGAAGCTTTCTTGGCTACAGAGAGGCCCCCGCCTCCCAATGTTTTCAAGTCTTCTAATTGGTCTTCTCACTCGCAGCATCAGAATTCAAGACAAAACACAACTAGACATCACCCAGTTAATCCTGGTATGCACTGTGGTCCTCAATCCAAGGCTACAGGTTTTGGTAGTATGGTTGGATCTTCTTCTGCTGTTGCTCAAGCAGCAAGTGTCGTACAGCAGGCAAGTGATAAACTAAAGAGAGACCGTGAAGGTTCAACTTCGACTGCTGAATGGGAGAGGAATCATTCATCCAAGGTGACTGGTGATTCATTTCAAACTTCAGATGGGCCCTTAAAGAAGAGAAAGATAGATGAGGTTCCCTCGAATGGTTGTGCAAGCTACATGGGAAACCACATGGGCATGGGAAATGGGGCTTCTAGTTGGGAAAGAATATTTGGCTCACTTAAAAAAAACAACTCTGGACCAGAGAGGACCTATACTTTTTCTGGGTCTAATATGAAGCTGCACAGTCAGAGAGAATTGTCTATGTTTGAAATACGCAAAATGTTAATGGATAAAGCCAAGGCTGAAATTCAAAAGAAACTAGAAGGATGGAGATCAGCAAGTAGAACAAAGGTTGCAAATATAGAAAAGGAAGGTAAGAAACAAAAAAGCCCAATAAGTGGTATTACTATTGATATAAAGAATTGTGTTGGAGAAGCAGATAATAGCAAAAACAATCAAAATGGTAGTTCTGTCTCTGACAAGTTTGATGGGAATGAGCAAGATCCAGCCCCAATGATTATTAATGTTCCTGACCCAGATTTTCACAATTTTGACATGGACCGAACTGAGAATTCTTTTGATGAGGACCAAGTCTGGGCTGCATATGATGACGATGATGGAATGCCTCGATTCTATGCTCGAGTTCACAAGGTGATCTCTTCGGAACCATTTAGGATGCGAATCAGTTGGCTAAATTATCGAAGTAATGTTGAGTTGGGGCCAATAAATTGGGTAGATTCTGGGTTTACAAAAACGTGTGGGGATTTCAGGGCAGGCAAGCATGAAATAACTGAAACATTAAACTCTTTCTCACACAAAGTGAGGTGGACAAAAGGGGCTCGTGGCATTATTAGAATATTCCCTGGGAAGGGGGAAGTCTGGGCTCTCTACAAAAATTGGTCCTCCGACTGGAATGAGCAGACTCCTGATGTTGTTATACACAAGTATGACATGGTGGAGGTACTGGAAGATTTTAGTGAGGAACAAGGTGTCACTGTTGTTCCATTGACAAAGGTTGCTGGTTTCCGAACAGTGTTCCAAAGGCACAAGGACAATAAGGAGGTCAGACGGATACCTAAAGAAGAAATGTTTCGCTTCTCTCATCAAGTTCCCAATCATTTGCTTACAGGTGAAGAAGCTCATAATTCTCCAAAAGGGTGTCGGGAGCTGGATCCAGCTGCAACCCCTTTGGATCTCCTTCAGGCAACACCCGAAGCTCCGATGATCGGAGAACCTAAAGAAAACAATGCCTAG 2169 0.4228 MECNKDEAVRAREIAVRKFTERDYASAKKFALKAQNLFADLEGISQFLTTLDIYISSEIKVSGEIDWYGILGVSPFADDDTIRKQYRKLALNLHPDKNKSVGAEGAFKLVSEAWSLLSDKSKRLMYNQKRSVKIPSQNRQMYSRSQTAASNSNGYHNFSSNVPSSTRTTDSSRSGVSSVPPQFKRPDTFWTVCNRCKTHYEYLRVYLNHTLLCPNCSEAFLATERPPPPNVFKSSNWSSHSQHQNSRQNTTRHHPVNPGMHCGPQSKATGFGSMVGSSSAVAQAASVVQQASDKLKRDREGSTSTAEWERNHSSKVTGDSFQTSDGPLKKRKIDEVPSNGCASYMGNHMGMGNGASSWERIFGSLKKNNSGPERTYTFSGSNMKLHSQRELSMFEIRKMLMDKAKAEIQKKLEGWRSASRTKVANIEKEGKKQKSPISGITIDIKNCVGEADNSKNNQNGSSVSDKFDGNEQDPAPMIINVPDPDFHNFDMDRTENSFDEDQVWAAYDDDDGMPRFYARVHKVISSEPFRMRISWLNYRSNVELGPINWVDSGFTKTCGDFRAGKHEITETLNSFSHKVRWTKGARGIIRIFPGKGEVWALYKNWSSDWNEQTPDVVIHKYDMVEVLEDFSEEQGVTVVPLTKVAGFRTVFQRHKDNKEVRRIPKEEMFRFSHQVPNHLLTGEEAHNSPKGCRELDPAATPLDLLQATPEAPMIGEPKENNA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01093 722 PANTHER BNAC03G44070D PROTEIN 1 701 - -
Pte16g01093 722 MobiDBLite consensus disorder prediction 231 255 - -
Pte16g01093 722 MobiDBLite consensus disorder prediction 681 722 - -
Pte16g01093 722 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Pte16g01093 722 MobiDBLite consensus disorder prediction 451 474 - -
Pte16g01093 722 MobiDBLite consensus disorder prediction 290 334 - -
Pte16g01093 722 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pte16g01093 722 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pte16g01093 722 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pte16g01093 722 Gene3D DnaJ domain 64 174 IPR036869 -
Pte16g01093 722 Pfam Domain of unknown function (DUF3444) 477 684 IPR024593 -
Pte16g01093 722 MobiDBLite consensus disorder prediction 231 256 - -
Pte16g01093 722 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pte16g01093 722 SMART dnaj_3 65 122 IPR001623 -
Pte16g01093 722 MobiDBLite consensus disorder prediction 292 306 - -
Pte16g01093 722 Pfam DnaJ domain 66 127 IPR001623 -
Pte16g01093 722 MobiDBLite consensus disorder prediction 135 181 - -
Pte16g01093 722 MobiDBLite consensus disorder prediction 307 324 - -
Pte16g01093 722 CDD DnaJ 66 119 IPR001623 -
Pte16g01093 722 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pte16g01093 722 MobiDBLite consensus disorder prediction 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01093 Pte-Chr16 30414748 30420778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01093 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.034 7.63e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01093 - - qsa:O6P43_019898 905.59