Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01092 ATGGTGTTTCAACACCCACTTAGCTACAAGCAAAAGGTGCAGCCTGTTTCAAAAGTAAAAGCAGATGAAAATGATGCTGGGCAATGCTCCCTGAACCTGAATGACCTCACAACTACTAAATCTGCTTCCCCAAGTTATAACATGTGGATGGTAAAGCACCCTTGTGCACTACGATCTTTTGATAGAATGATGAAAGCAGCAAAGGGAAAGAGACTGGTTGTGTTTTTGGATTATGATGGTACTCTATCACCAATAGTAAATGATCCCGATCGAGCATTCATGTCTGACGAGATGCGTGCTGCAGTGCGTGAAGTCGCCAAATATTTTCCGACGGCGATAATTAGCGGAAGAAGGCGAGACAAGGTGAAAGAATTTGTGAAATTAAACAACGTATATTATGCTGGAAGCCATGGGATGGACATAATGGTCCCAGCAATGCCACTGAAGTCTTCTGAAGGGAAGCATTCGACCTTAAACGCCAACAGGAAGGGACGTGAATTGATCTTTCAACCAGCACAGAAATATCTGCCTGCAATTGAAGAGATGTTTACAATCTTAAAGGAGAAACTCTCTTCAGTTCAAGGTGCAAAGATAGAAGACAATGGCTTCTGTATATCTGTGCATTATCGACATGTTTCAGAAGAGGTAGAAATATTTCCATTGCATGAATTTCATGGGAAGGTCATGGAAATAAGGCCATCGATAGATTGGAATAAAGGGCATGCCCTAGAATATTTTCTTCACACCCTTGGACTCAGCAATTCCAACGATGTTCTTCCACTTTACATTGGAGATGATCGAACCGATGAAGATGCTTTCAAGGTAATACAAAACAGGGGGCAGGGTTATGCCATTGTAGTATCCTCAACACCAAAGGATACTAAAGCTACATTCTCTTTGTATGACCCATCAGAGGTCCTGACTTTCCTCCTACGACTGACCAGGTGGAGGAAGAATTCCTCTTTGAGTAGGCTAGTTTAA 981 0.422 MVFQHPLSYKQKVQPVSKVKADENDAGQCSLNLNDLTTTKSASPSYNMWMVKHPCALRSFDRMMKAAKGKRLVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVREVAKYFPTAIISGRRRDKVKEFVKLNNVYYAGSHGMDIMVPAMPLKSSEGKHSTLNANRKGRELIFQPAQKYLPAIEEMFTILKEKLSSVQGAKIEDNGFCISVHYRHVSEEVEIFPLHEFHGKVMEIRPSIDWNKGHALEYFLHTLGLSNSNDVLPLYIGDDRTDEDAFKVIQNRGQGYAIVVSSTPKDTKATFSLYDPSEVLTFLLRLTRWRKNSSLSRLV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01092 326 Gene3D - 72 162 IPR023214 -
Pte16g01092 326 Gene3D - 184 324 IPR023214 -
Pte16g01092 326 Pfam Trehalose-phosphatase 75 215 IPR003337 GO:0003824|GO:0005992
Pte16g01092 326 Pfam Trehalose-phosphatase 227 304 IPR003337 GO:0003824|GO:0005992
Pte16g01092 326 CDD HAD_TPP 73 306 - -
Pte16g01092 326 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 321 IPR044651 GO:0004805|GO:0005992
Pte16g01092 326 SUPERFAMILY HAD-like 73 316 IPR036412 -
Pte16g01092 326 NCBIfam trehalose-phosphatase 70 314 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01092 Pte-Chr16 30405044 30407197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01092 41 310 Trehalose Biosynthesis Gene Families AT1G70290 24.653 4.67e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01092 K01087 - qsa:O6P43_015032 427.172