Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01079 ATGGTTGTGTATACAAAGGAAAGTTACTTAAGCGGTCCTTTCGTTGCAATCAATACGTTGACCAAATCCAAAACCAATGGCCAAGAGTTTATCAATGAATTTGCAACCATTGGAAGAATCCACCATGTCAACGTGGTGCAGCTGATCGGGTTTTATGTGGAAGGATCCAAGCGTGCTCTTGTTTGTGAGTTCATGCCTAATGGTTCTCTCGACAAACACATATTCTCCAAACAAGGTGGGAAGAGTAATGATTTAAATTGTGATGCTATATGTATTCAATATCTCTTGGAGTGGCTAGAGGTATTGCGTACTTTCATTAAGGTTGTGACATGCAGATTTGATATCAAGCCTCGCAACATTCTTCTGGATGAAAACTTTGTCCCAAAGGTTTCAGATTTTGGACTTGCTAGGCTTTATGCCATAGACGACAGCATTGTCTCAGTTACAGCAAGGGGAACATTGGGATACATCGCTCCTGGGTTGTCCTGCAAGAACATTTTTTGGGTCTCCTACAAGGCAGATGTGTATTAG 531 0.4143 MVVYTKESYLSGPFVAINTLTKSKTNGQEFINEFATIGRIHHVNVVQLIGFYVEGSKRALVCEFMPNGSLDKHIFSKQGGKSNDLNCDAICIQYLLEWLEVLRTFIKVVTCRFDIKPRNILLDENFVPKVSDFGLARLYAIDDSIVSVTARGTLGYIAPGLSCKNIFWVSYKADVY* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01079 176 Gene3D Transferase(Phosphotransferase) domain 1 2 176 - -
Pte16g01079 176 SUPERFAMILY Protein kinase-like (PK-like) 3 176 IPR011009 -
Pte16g01079 176 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 176 IPR045874 GO:0004672
Pte16g01079 176 SMART serkin_6 4 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01079 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01079 176 Pfam Protein kinase domain 11 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01079 Pte-Chr16 30280003 30280533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01079 2 176 Receptor kinase-like Gene Family AT5G38280 48.876 1.55e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte16g01079 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01079 - - qsa:O6P43_019916 200.29