Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g01079 | ATGGTTGTGTATACAAAGGAAAGTTACTTAAGCGGTCCTTTCGTTGCAATCAATACGTTGACCAAATCCAAAACCAATGGCCAAGAGTTTATCAATGAATTTGCAACCATTGGAAGAATCCACCATGTCAACGTGGTGCAGCTGATCGGGTTTTATGTGGAAGGATCCAAGCGTGCTCTTGTTTGTGAGTTCATGCCTAATGGTTCTCTCGACAAACACATATTCTCCAAACAAGGTGGGAAGAGTAATGATTTAAATTGTGATGCTATATGTATTCAATATCTCTTGGAGTGGCTAGAGGTATTGCGTACTTTCATTAAGGTTGTGACATGCAGATTTGATATCAAGCCTCGCAACATTCTTCTGGATGAAAACTTTGTCCCAAAGGTTTCAGATTTTGGACTTGCTAGGCTTTATGCCATAGACGACAGCATTGTCTCAGTTACAGCAAGGGGAACATTGGGATACATCGCTCCTGGGTTGTCCTGCAAGAACATTTTTTGGGTCTCCTACAAGGCAGATGTGTATTAG | 531 | 0.4143 | MVVYTKESYLSGPFVAINTLTKSKTNGQEFINEFATIGRIHHVNVVQLIGFYVEGSKRALVCEFMPNGSLDKHIFSKQGGKSNDLNCDAICIQYLLEWLEVLRTFIKVVTCRFDIKPRNILLDENFVPKVSDFGLARLYAIDDSIVSVTARGTLGYIAPGLSCKNIFWVSYKADVY* | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g01079 | 176 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 176 | - | - | |
Pte16g01079 | 176 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 176 | IPR011009 | - | |
Pte16g01079 | 176 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 11 | 176 | IPR045874 | GO:0004672 | |
Pte16g01079 | 176 | SMART | serkin_6 | 4 | 169 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte16g01079 | 176 | ProSiteProfiles | Protein kinase domain profile. | 1 | 176 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte16g01079 | 176 | Pfam | Protein kinase domain | 11 | 162 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g01079 | Pte-Chr16 | 30280003 | 30280533 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g01079 | 2 | 176 | Receptor kinase-like Gene Family | AT5G38280 | 48.876 | 1.55e-41 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pte16g01079 | Pkinase | 1.9e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g01079 | - | - | qsa:O6P43_019916 | 200.29 |