Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01068 ATGAGTGGTCATGGTGTTAAATGGTTTAGAGGGTCATTGATCGGAAAAGGAAGTTTTGCATCGGTTTATATAGCCACTTTGAAGAAACCTAAAACAAAGTCAGGATTTCTGCCAATGGTTCTGGCTGTAAAATCTGCCAACGTATCAGACTGTGCTACACTTCAGAAGGAGAGGGAAGTACTAGAAGAAATTCGAGGAAGCCCTAACGTGATTGATTTCTTTGGTGAAGAGATCACTCATGATGAGACCAGCGGTCAAATGACTTACAACTTGTTGTTCGAGTATGCTTCTGGTGGAACCCTTGGTGATGCGATAAAAGACTTGGATGGCTGCAGTGTACCTGAGTTATTTGCCAGAGAGTATACAAAATCAATTGTTAGAGGTCTTCTACACATCCATGACCGTGGGTATGTTCATTGTGACTTGAAACCGGAGAATATCTTGCTCGTCTCAGCACAATCTAGTTCTTGTGTTCGTGGGGTTCGCTACATTGCCAAAATTGGAGACCTGGGATTGGCAAAGAAAGAAAAAAAGCAGAATAAGAGGAGGAGGGAGGAAAGTTATCGAAGGGGCACCGACTCTTACATGGCGCCAGAAACTGTGGTTGACAAAGTGCAAGGACCTCCCTCTGACATTTGGGCTCTTGGCTGTGTGGTGTTCAAGATGCTTACCGGGACGTCAATTTGGGCTGAGGAGGCCTCAAGAGAGGATATCTGGTGTCTGCTATCTGATAAGTGCTGGATACCCAAGATTCCTAATGGAATTTCTAGTGATGCTAGGAGCTTCTTGAAGGCTTGCTTTGTGAGAAATCCAATGTTCAGGTTCACTGCTGAGATGCTACTAGATCACCCATTTTTGGCTTCTGCTGAAGATGCATAA 879 0.4437 MSGHGVKWFRGSLIGKGSFASVYIATLKKPKTKSGFLPMVLAVKSANVSDCATLQKEREVLEEIRGSPNVIDFFGEEITHDETSGQMTYNLLFEYASGGTLGDAIKDLDGCSVPELFAREYTKSIVRGLLHIHDRGYVHCDLKPENILLVSAQSSSCVRGVRYIAKIGDLGLAKKEKKQNKRRREESYRRGTDSYMAPETVVDKVQGPPSDIWALGCVVFKMLTGTSIWAEEASREDIWCLLSDKCWIPKIPNGISSDARSFLKACFVRNPMFRFTAEMLLDHPFLASAEDA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01068 292 ProSiteProfiles Protein kinase domain profile. 8 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01068 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Pte16g01068 292 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 288 - -
Pte16g01068 292 Gene3D Transferase(Phosphotransferase) domain 1 7 292 - -
Pte16g01068 292 SUPERFAMILY Protein kinase-like (PK-like) 8 288 IPR011009 -
Pte16g01068 292 Pfam Protein kinase domain 12 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01068 292 SMART serkin_6 8 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01068 292 ProSitePatterns Protein kinases ATP-binding region signature. 14 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01068 Pte-Chr16 30129318 30130196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01068 6 287 MAP Kinase Kinase Kinase AT4G36950 40.830 9.07e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte16g01068 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01068 - - cave:132188169 328.561