Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01060 ATGGATGCTCACTCCTTCCAGCTAAGCATGGCCCCGATGTACATGGCATTTCTTCGATTTATGGGAGATGAGAATGAAGCTAGAAATTATACCTACAGTCTTGAGGTTGGAACCTGCAATAGGAAGCTTATTTGGAAAAGTACCCCGCGAAGTATCCGGGATAGCCACAGGAAAGTTAGGGACAGCCATGATGTTCTTATTATCCAGCGAAACATGGCCCTTTCTTCTCTGGTGGGGATAGGAAGGAGCTGA 252 0.4643 MDAHSFQLSMAPMYMAFLRFMGDENEARNYTYSLEVGTCNRKLIWKSTPRSIRDSHRKVRDSHDVLIIQRNMALSSLVGIGRS* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01060 83 SUPERFAMILY TRAF domain-like 11 74 - -
Pte16g01060 83 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 79 IPR008974 GO:0005515
Pte16g01060 83 Pfam Seven in absentia protein family 5 75 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01060 Pte-Chr16 29974505 29974907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01060 5 74 C3H Transcription Factor Family AT2G41980 74.286 3.53e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01060 K04506 - jre:108994059 126.716