Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01031 ATGAGTGATCATGGTGTTACATGGTATAGAGGTTCGATGATCAGCAAAGGAAATTTTGGTTCGGTTTATATGGCCACTTTGAAGAAACCCAAAACAAGGTTAGGATGTCTACCAACAGTCATGGCTGTAAAATCTGGTAAGCTGTCTGACTCTGATACACTTAAGAAGGAAAAAGAAATACTAGAAGATATACAAGGGACCCCTTACGTGATAGGTTTCATTGGCGACGAGATCACTGTAGATGAAAGCAGCGGTGAAATGACGTATAACTTGTTGTTGGAGTACGCTTCTGGTGGAACACTTGCTGATTTGATGAGAAAGTTCGGTTGTCATGGTTTGCCTGAGTCACTTGTCAGGGTTTATACAAAGTCTATTGTCAGTGGTCTTCTGCACATCCATGAATGTGGATACGTTCACTGTAACATGAAACCTGAGAGTATCTTGCTCGTGTCCGAACCGTGTGATTGTTGCGATGGGATTAGCTACATGGCCAAGATTGGAAACCTGGTAATGGCAAAGAAACAAGAGAGACCGCAGGGTAAGAGGAGGAGGGTGATTGATTCTGTAAGAGGCACCCTCTCCTATATGGCACCAGAAACTGTGGTTGACAAAGTTCAAGGACCTCCATCTGATATTTGGGCTCTTGGCTGTGTGGTGTTTGAGATTCTTACAGGAAAATCAATCTGGAGCGAGAAGGAGCCTGATCACAGCATTTGGGGTTTGCTGTCTGCTGAGTGCTGGTCACCCAAGATTCCAGGTGGGATTTCCAATGAGGCAAGGAGCTTCTTGAAGGCTTGCTTTGTGAGGGAACCAATGTTCAGGATCACTGCTGAGATGTTAATGGATCACTCATTTGTGACTGGGTGGTGCGAAGATTCTAGTTGCGCAGAAATTGATGTTCCAGTTGAATGTTGTTTCTAA 921 0.443 MSDHGVTWYRGSMISKGNFGSVYMATLKKPKTRLGCLPTVMAVKSGKLSDSDTLKKEKEILEDIQGTPYVIGFIGDEITVDESSGEMTYNLLLEYASGGTLADLMRKFGCHGLPESLVRVYTKSIVSGLLHIHECGYVHCNMKPESILLVSEPCDCCDGISYMAKIGNLVMAKKQERPQGKRRRVIDSVRGTLSYMAPETVVDKVQGPPSDIWALGCVVFEILTGKSIWSEKEPDHSIWGLLSAECWSPKIPGGISNEARSFLKACFVREPMFRITAEMLMDHSFVTGWCEDSSCAEIDVPVECCF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01031 306 Gene3D Transferase(Phosphotransferase) domain 1 85 300 - -
Pte16g01031 306 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 288 - -
Pte16g01031 306 ProSiteProfiles Protein kinase domain profile. 8 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g01031 306 SUPERFAMILY Protein kinase-like (PK-like) 9 293 IPR011009 -
Pte16g01031 306 Gene3D Phosphorylase Kinase; domain 1 7 84 - -
Pte16g01031 306 Pfam Protein kinase domain 13 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01031 Pte-Chr16 29691658 29692578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01031 8 292 MAP Kinase Kinase Kinase AT3G50310 40.767 1.55e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte16g01031 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01031 - - cave:132164209 313.923