Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01021 ATGGGTGAAATGGTCGTTTCAGACAAGGGTGGTGCGAAGAACCTGCAAGTTACTGAAGCATTTCCTATTAGTAACAAGATGATGATGACGAGGCTGCTTCATCATAATCATCACTACCGTCCATTATCATCATCGTCAATATTTGATAATGATCATACCAGTGGGGATTATGGGGATGGGAATGGTCCCACCTCTTGTATGCCTATGACATATAGTAATCATATATACCAAGTTGTAGCTGGCTCTCCTTGTGCTCATTATACCATCAACGCAAGCGATAGTGCCTCTGTACGTGTTGGACCTTTGCAGCCTTTAGACATATTCACCAGTACTTCAACTCCTACTTCTACACCAGCTCGTGCCACCACCGCCTTCAAATCCCCAGCGGGGATGGCGGCCTCTTTGGGTTTTCCTTTTACAAATGCACAGTGGAAGGAGCTTCAAAGACAAGCAATGATTTACAAGTACATGGTGGCCTCTGTTCCTGTTCCTCCTGATCTTCTGATTCCTCTTACCAGAGGCACCCCTGTTTCAGATAACTCTCACTCTCCTTTGGATGCTCGATTCAACCTAAGGTTGTCCAGCGGTGCTGACCCAGAACCAGGAAGATGCAGAAGAACGGATGGCAAAAAATGGAGATGTTCCAGGGATGTGGCTCCTAATCACAAGTACTGTGAGCGTCACATGCACAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCATGCCAATAATACCAACAATAGCAGTCACCATACCAAGAAGAGTCGCCATGAACATGATTATAACGCTTTTTCTTCTACATCCCCTGTTACTGTTGCTATTTCCAACCCCACAATCAGCAAAACTAGCTCTTCATCTAGATTCCTCTCACCTGCTTCGAATCAAGCATACCCTCAGCTCCCGGTTTCCCATGACAAATTTGCTTTCAAATCTGCAAACTTCGATTCCTTGGCTTCACTTTCATCCGATAAAGAACCCAGGGGCTTAGACTGGATGCTCAAAGACAGTGCAGTTTCCTTGGCTACATCTGATCTATGGCTGCCTTTGACTCAGACCAAAACCGGCTTATCAACTGAGAGTTCATGCCAGCACAGTATTTCTCTTTCAAATCCAAATTATGAAGATTCTATGTTCCTCAATCCTTATGCAATTTTCAGTTCAGGAGAACAACAAAATAGAGACTGTCCTCTGTTCTTCAATCCCGATATTCTTCCAATGGGCAACACCTCTCATTCGGAAAATTGCAGAGGTTTCATTGATGCATGGTCTAATTCAAAAACAAATAAAAACAATACCCAACAAAGCAACGACGAAGTTTCCCCAAATGGTAAATTGTCACTTTCTTCTTTAAATTTATCAATGGGAACGAATGGTGCTGCCATGTATGAGGACATGGGTGATATCCACATGGGGTTAGGCCTGATGGAGACTAATGGCGGCAACACTGATAATGGCCCTAAATCGCATCTCTCGAGTTGGCTAACTCCTCCTTGGGTATCCTCCACACCAGGTGGTCCATTAGCTGAAGTATTAAGGCCAAGCACAGTTTCTGCTACCAAGGATGCGGCCTCCAATCCATCCTCTCCAGTCGTTACAAATGGTGAATCTGGAAGTCCAATGGCTACTGTGGCCTCATCACCATCTGGGGTTTTGCAAAAGACAGTTAATTCTTTGTCTGACAGTAGCAGCGCCAGCAGTCCTACTAATGCAAGTTCAAGGGCTAATTCTGAAATGGCGATGCTATGGATGAGTCAACAGAGCAAATTAGCATCTTCCACTTAA 1788 0.448 MGEMVVSDKGGAKNLQVTEAFPISNKMMMTRLLHHNHHYRPLSSSSIFDNDHTSGDYGDGNGPTSCMPMTYSNHIYQVVAGSPCAHYTINASDSASVRVGPLQPLDIFTSTSTPTSTPARATTAFKSPAGMAASLGFPFTNAQWKELQRQAMIYKYMVASVPVPPDLLIPLTRGTPVSDNSHSPLDARFNLRLSSGADPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVHANNTNNSSHHTKKSRHEHDYNAFSSTSPVTVAISNPTISKTSSSSRFLSPASNQAYPQLPVSHDKFAFKSANFDSLASLSSDKEPRGLDWMLKDSAVSLATSDLWLPLTQTKTGLSTESSCQHSISLSNPNYEDSMFLNPYAIFSSGEQQNRDCPLFFNPDILPMGNTSHSENCRGFIDAWSNSKTNKNNTQQSNDEVSPNGKLSLSSLNLSMGTNGAAMYEDMGDIHMGLGLMETNGGNTDNGPKSHLSSWLTPPWVSSTPGGPLAEVLRPSTVSATKDAASNPSSPVVTNGESGSPMATVASSPSGVLQKTVNSLSDSSSASSPTNASSRANSEMAMLWMSQQSKLASST* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01021 595 MobiDBLite consensus disorder prediction 480 499 - -
Pte16g01021 595 Pfam WRC 199 241 IPR014977 -
Pte16g01021 595 MobiDBLite consensus disorder prediction 519 595 - -
Pte16g01021 595 ProSiteProfiles QLQ domain profile. 138 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte16g01021 595 SMART QLQ_2 137 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte16g01021 595 PANTHER GROWTH-REGULATING FACTOR 5 122 448 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte16g01021 595 Pfam QLQ 138 171 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte16g01021 595 MobiDBLite consensus disorder prediction 230 258 - -
Pte16g01021 595 ProSiteProfiles WRC domain profile. 198 242 IPR014977 -
Pte16g01021 595 MobiDBLite consensus disorder prediction 518 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01021 Pte-Chr16 29628325 29631689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01021 368 565 GRF Transcription Factor Family AT5G53660 35.885 1.04e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte16g01021 WRC 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01021 - - qsa:O6P43_014940 607.831