Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01008 ATGGATTCTTTTGCAGAAGAAATAGACATGAGTTTAATGGAGGCAAAGCAATCGGCAATAGAGTTGGCGACTTTGGCAGTCTTCCCTTTGGTGCTCAAATCAGTGATTGAACTTGATGTCTTGGAGATCATAGCCAAGGCTGGCCCCGGCGCCTATCTCTCACCATCTGAGATTGCAGCTCAGCTCCCCACACAGAATGCAGATGCACCAGCCACACTCAACCGCATGCTCCGTCTCTTAGCTGCTCACTCAGTTCTCACATACTCTACTCGTCACCTCCCCAATGGAAAGGTGGAGTTGCTCTACGGTCTAACTCCAGCCTGCAAGTTCCTGACAAAAAATAAGGACGGTATTTCTTTTGTGCCCCAGATACTATGTGGTCTGGGCAAAGTCTACATGGAGAGCTGGAACTGCATGAAAGACGCAGTTCTTGAAGGTGGCATTCCGTTCAACAAGGCCTATGGGATGAGCGTATTTGAGTATCACGGTAAAGATTCCAAGTTGAGCCATTTATTCAACGAGGCCATGACTGGTACGAGTACCATGTTCATGAGTGAAGTTTTGAAGCTTTACAAGGGTTTCGAGGGCATTCATTCCCTTGTTGATGTCGGTGGTGGGACTGGGGCTGTCATTCACATGATTACGTCCAAGTATCCCTCCATAACTGGCATTAATTTTGACTTGCCGTTTGTCATTGCAGATGCACCAGATTATCCTGGTGTAAAACATGTAGGTGGGGATATGTTTGTCAGCGTACCAAGAGCAGAAGCAATTTTCTTGAAGTTCGTACTTCATGATTGGGGTGATGAATATTGCGCAAAACTTTTGAAAAATTGCTACGATGCACTGCCAAATGGGGGAAAGGTGATTGTTGCTGAACACATTGTTCCGGAAACTCCGGAACCTCAGGCTTTGACTCAGGCTACCCTCCGGTATGATCTGGCTATGATGGCAGTGACTTCAAATGGCAAAGAGAGAACTGAGAAAGAGTTTCAGGCTTTGGCTGAAGGAGCTGGTTTCCAACAATTTCAAGTCACCTTTTGCTCTTACCAATACGTATATCTCATGGAATTTCTCAAGGCTTGA 1086 0.4604 MDSFAEEIDMSLMEAKQSAIELATLAVFPLVLKSVIELDVLEIIAKAGPGAYLSPSEIAAQLPTQNADAPATLNRMLRLLAAHSVLTYSTRHLPNGKVELLYGLTPACKFLTKNKDGISFVPQILCGLGKVYMESWNCMKDAVLEGGIPFNKAYGMSVFEYHGKDSKLSHLFNEAMTGTSTMFMSEVLKLYKGFEGIHSLVDVGGGTGAVIHMITSKYPSITGINFDLPFVIADAPDYPGVKHVGGDMFVSVPRAEAIFLKFVLHDWGDEYCAKLLKNCYDALPNGGKVIVAEHIVPETPEPQALTQATLRYDLAMMAVTSNGKERTEKEFQALAEGAGFQQFQVTFCSYQYVYLMEFLKA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01008 361 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Pte16g01008 361 CDD AdoMet_MTases 200 291 - -
Pte16g01008 361 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Pte16g01008 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 357 IPR029063 -
Pte16g01008 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Pte16g01008 361 Pfam Dimerisation domain 31 81 IPR012967 GO:0046983
Pte16g01008 361 Gene3D - 4 111 IPR036388 -
Pte16g01008 361 PANTHER O-METHYLTRANSFERASE 22 343 IPR016461 GO:0008168
Pte16g01008 361 Pfam O-methyltransferase domain 136 341 IPR001077 GO:0008171
Pte16g01008 361 SUPERFAMILY "Winged helix" DNA-binding domain 11 114 IPR036390 -
Pte16g01008 361 FunFam Caffeic acid 3-O-methyltransferase 3 111 - -
Pte16g01008 361 FunFam Caffeic acid O-methyltransferase 112 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01008 Pte-Chr16 29489057 29490525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01008 14 360 Monolignol Biosynthesis Gene Families AT5G54160 56.196 1.28e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01008 K13066 - zju:107414981 445.662