Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01005 ATGGGTACAACTGGTGAAACTCAGATAACTCCAACCCAAGTATCTGATGAAGAAGCACACCTCTTTGCCATGCAATTGGGAAGTGCATCTGTGCTTCCTATGGTCCTGAAATCAGTGATCGAACTTGATGTGCTAGAGATTATCGCTAAGGCTGGTTCTGGAGCATATCTCTCACCTGCTGACATAGCTTCCAAGCTTCCAACCAAGAATCCGGATGCTGCAATTATGCTTGACCGCATGTTGCGCCTCTTGGCCAGTTACTCTGTTCTCACATATACACTTCGTACTCTCCCTGATGGCAAAGTGGAAAGACTCTATGGTCTTGCCCCAGTCTGCAAATACTTTACCAAAAATGAAGATGGTGTCTCTATTGCTCCTATTGCTCTCATGAATCAGGACAAGATCCTCATGGAAAGCTGGTACGCCATTTCTTACCCATCTTTTTACTTGCCCTTTGGTTTTCGTTGCAATCTCACAACCCCATCTGAGTTAGATTTGCTTTGCTTCTGGTGA 513 0.4503 MGTTGETQITPTQVSDEEAHLFAMQLGSASVLPMVLKSVIELDVLEIIAKAGSGAYLSPADIASKLPTKNPDAAIMLDRMLRLLASYSVLTYTLRTLPDGKVERLYGLAPVCKYFTKNEDGVSIAPIALMNQDKILMESWYAISYPSFYLPFGFRCNLTTPSELDLLCFW* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01005 170 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 170 IPR016461 GO:0008168
Pte16g01005 170 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Pte16g01005 170 Gene3D - 1 115 IPR036388 -
Pte16g01005 170 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Pte16g01005 170 PANTHER O-METHYLTRANSFERASE 23 141 IPR016461 GO:0008168
Pte16g01005 170 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01005 Pte-Chr16 29415126 29416766 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01005 1 143 Monolignol Biosynthesis Gene Families AT5G54160 70.629 1.79e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01005 K13066 - zju:107414981 243.817