Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01004 ATGATGGAGTTGGAGTTGTCCTTGTTGAACCACGCAAGCAATAGAATCAAGAAGCAGAACTACTTGTTCAATTTTCGAATTACACTCTGCTTGCTATTCTTCTCATCTGCACAATCAACACGACCAGGAGGATACGATGTAAGCGAACCATCCGTGTTGTCATCAACATCAACAAGCCCTGTCAAGCCTTCGACTCCACTCCTTATCTTTCTGCAAACATTGCAAGAAACCGCCTTTACCCTTACAACCTCTGCGAAACCAAACTCCGATTTCGATCCTAAACTCTATGTAGATCTGCCCCTCAAATTTAATTTATCAACCACTGAGAAAGCTTTCGAAGACCTCCCCAGATCTGCTAATGGCACTGTACTTTCTCTCAAAGATTTCGAAACTTTTATTCACAACTACTTCGAGGATGCAGGGGCAGATTTGGAACTCTACCAGCCACCTGATTTTGTGCCCAACCCCAATGGCTTCTTGCCGACGGTGAAGCATCCAGAGGTGAGAGCCTGGGCTTTGGAGGTCCATTCTCTCTGGAAGAACTTGAGTCGCAGAGTCTCTGCCACCGTTCAAAACCAACCACAATGGCATACCTTGCTTCCTCTTCCCAACAATGTCATTGTTCCTGGTTCAAGGTTCCGTGAGGTTTATTACTGGGATTCATACTGGATTATCAGGGGCATACTGGCAAGCAAAATGTATGACACTGCTAAAGCGATTGTCAGCAACCTGGTTTTTCTTGTACAAGAATATGGTTTTGTGCTCAATGGTGCAAGGGCCTACTACACCAACAGAAGCCAGCCTCCTCTCTTGAGTGCAATGATTTACGAGATATATATAAGGACGGGTGATGCAAAATTCGTTGAGAAATCTCTTCCTGCATTGCTCAACGAGTATCAATTCTGGAGTTCTGGAATTCATAGTGTGACAGTTGAAGATCACGAAGGTTCTGCTCATAACTTGAGTCGGTATTATGCATTGTGGAACAAACCTAGACCAGAATCTTCAACAAAGGACAAGGAACTTGCTTCCAAGCTAACTAATGAGTCAGAAAGACAACATTTTTACCGCGAAGTGGCTTCAACAGCTGAAACTGGATGGGACTTTAGCACGCGTTGGATGAGGAATCCTCCGAATATAATGACTTTGGCTACCACATCAATACTCCCTGTTGATTTGAATGCATTGATTTTGAGTATGGAACTGAACATAGCATTCTTTGCAAATATTACCGGAGACATCGAGACTGCTGAAAGGTTTTCAGAATATTCTGAAGCCAGAGTGAAAGCAATCACCAGAGTATTTTGGAATGCAGAAATGGGACAATGGCGTGATTACTGGCTTGCTGATAATTTGTGCAGTGAGCCGGAAGTTTGGAGAGCTCAGCGTCAGAATCAAAATCTATTTGCTTCAAACTTTGTCCCTCTATGGATAAAGCCATTTTACTCGAACAATTTGATCGTGGAGAAAGCTTTAGAAAGTCTTAAACTTTCTGGACTGATTTGTGATGCTGGGGTTGCAACTTCTTTGACCAATTCAAGTCAACAATGGGATTATCCCAATGGTTGGGCTCCTCTGCAGCACATGATAATTGAAGGCCTGTCGAAATCTGGATTGGAGAATGCTAGAGCTATGGCAGAAGACATTGCTGTCAGGTGGATCAAAAGCAACTATGTGTCATTCAAGAAAACAGGTGTAATGCATGAGAAATATGACGTAACACGTTGTGGAGAATATGGAGGTGGTGGTGAATATAAACCCCAGACTGGTTTTGGTTGGACCAATGGAGTTGTGTTGGCATTGTTGGAGGAGTTTGGATGGCCTCAAGATCGAAACATAAATTGTTGA 1848 0.4318 MMELELSLLNHASNRIKKQNYLFNFRITLCLLFFSSAQSTRPGGYDVSEPSVLSSTSTSPVKPSTPLLIFLQTLQETAFTLTTSAKPNSDFDPKLYVDLPLKFNLSTTEKAFEDLPRSANGTVLSLKDFETFIHNYFEDAGADLELYQPPDFVPNPNGFLPTVKHPEVRAWALEVHSLWKNLSRRVSATVQNQPQWHTLLPLPNNVIVPGSRFREVYYWDSYWIIRGILASKMYDTAKAIVSNLVFLVQEYGFVLNGARAYYTNRSQPPLLSAMIYEIYIRTGDAKFVEKSLPALLNEYQFWSSGIHSVTVEDHEGSAHNLSRYYALWNKPRPESSTKDKELASKLTNESERQHFYREVASTAETGWDFSTRWMRNPPNIMTLATTSILPVDLNALILSMELNIAFFANITGDIETAERFSEYSEARVKAITRVFWNAEMGQWRDYWLADNLCSEPEVWRAQRQNQNLFASNFVPLWIKPFYSNNLIVEKALESLKLSGLICDAGVATSLTNSSQQWDYPNGWAPLQHMIIEGLSKSGLENARAMAEDIAVRWIKSNYVSFKKTGVMHEKYDVTRCGEYGGGGEYKPQTGFGWTNGVVLALLEEFGWPQDRNINC* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01004 615 ProSitePatterns Trehalase signature 2. 516 525 IPR018232 GO:0004555|GO:0005991
Pte16g01004 615 PANTHER TREHALASE 56 613 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 SUPERFAMILY Six-hairpin glycosidases 86 608 IPR008928 GO:0005975
Pte16g01004 615 Gene3D - 81 614 IPR012341 GO:0005975
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 321 338 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 509 525 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 388 405 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 356 373 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 431 447 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 251 269 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 PRINTS Glycosyl hydrolase family 37 signature 589 602 IPR001661 GO:0004555|GO:0005991
Pte16g01004 615 Pfam Trehalase 91 606 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01004 Pte-Chr16 29411269 29413116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01004 54 616 Trehalose Biosynthesis Gene Families AT4G24040 55.752 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01004 K01194 - qsu:111986510 806.208