Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01003 ATGTGGAATGTTAAGAGATTCATTCTCAACGATCAGTGGATATGCCATGGTTGGAGTGATGAACACTGCTTGAGATTTTTGAAGAACTGCTATGAAGCACTCCCTAACAACGGAAAGGTGATCGTTGCCGAATGCATTCTTCCAGTAGCTCCAGAGAGCAGCCTTGCCACAAAGTGTGTTCTCCAAACGGATGTGATTATGTTGGCCCAAAGCCGAGGTGGGAAAGAGAGAACAGATGAAGAGTTTGAGTATCTGGCTAAGGCAGCTGGGTTCCAAGATTTCCAGGTTGTGTGCTGTGCTTTTAACACATACATTATGGAATTCATCAAGAAAGCTTGA 339 0.4425 MWNVKRFILNDQWICHGWSDEHCLRFLKNCYEALPNNGKVIVAECILPVAPESSLATKCVLQTDVIMLAQSRGGKERTDEEFEYLAKAAGFQDFQVVCCAFNTYIMEFIKKA* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01003 112 PANTHER O-METHYLTRANSFERASE 9 94 IPR016461 GO:0008168
Pte16g01003 112 Gene3D Vaccinia Virus protein VP39 12 100 IPR029063 -
Pte16g01003 112 Pfam O-methyltransferase domain 12 92 IPR001077 GO:0008171
Pte16g01003 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 108 IPR029063 -
Pte16g01003 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 110 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01003 Pte-Chr16 29410153 29410491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01003 12 111 Monolignol Biosynthesis Gene Families AT5G54160 64.000 6.17e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01003 K13066 - gmx:100780100 175.252