Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g01002 ATGAGTTCCACGGCTGAAACGAAACCATCTTCAACCCAAGTATCAGATGAAGAAGCAAACCTCTTCGCCATGCAGTTGGGAAGTGCCTCTGTGCTTCCCATGATTCTGAAGTCGGTGATTGAACTCGATGTGTTAGAAATAATAGCCAAGGCTGGCCATGGGGCATGTCTGTCACCTGCTGACATAGCTTCCCAGCTTTCATCAAAGAACCCAGATGCAGCAATCATGCTGGACCGCATGCTGCGCCTGTTGGCCAGTTACTCTGTTCTCACATTTTCTCTTCGTACCCTTCCTGATGGCAAGGTAGAGAGGCTGTATGGTCTTGCCGCAGTCTGTAAATTCTTGACCAAGAATGAAGATGGGGTTTCTATTGCTCCTCTTCTTCTCATGAACCACAACAACGTCTTCATGGAAAGCTGGCACTACTTGAGAGAAGCAGTTCTTGAGGGAGGCATTCCATTTAAGAAGGCTCATGGGATGTCTACTGTTGAGTATCACAGCAATGATCCCAGGTTCAAGAACATTTTTAACAGAGGAATGTCCGAGCACTCAACCATCACCATGAAGAAAATTCTTGAGACTTATAAAGGATTTGAAGACCTCACTTCCGTGGTTGATGTGGGTGGTGGAACTGGAGCTCTGGTCAGCATGATTATCTCTAAATACCCATACATAAAAGGTATCAACTTTGATTTACCCCATGTCATTGAAGATGCTCCAGCTTATCCAGGTGTGGAACATGTTGGGGGAGATATGTTTGTCAGTGTACCAAAAGGGGATGCCATGTTCATGAAGGTCAGTGTCTTACCTACGCCATGTGTCCCACGAGCGAAGAAAGAATACTATTCAGTAGATTTACATTTGGCTGATATTTATATTGAAGCCTTGGCAACTCCAGTCAAAGCAGAATACCTACTTGTTGCTTAA 927 0.4488 MSSTAETKPSSTQVSDEEANLFAMQLGSASVLPMILKSVIELDVLEIIAKAGHGACLSPADIASQLSSKNPDAAIMLDRMLRLLASYSVLTFSLRTLPDGKVERLYGLAAVCKFLTKNEDGVSIAPLLLMNHNNVFMESWHYLREAVLEGGIPFKKAHGMSTVEYHSNDPRFKNIFNRGMSEHSTITMKKILETYKGFEDLTSVVDVGGGTGALVSMIISKYPYIKGINFDLPHVIEDAPAYPGVEHVGGDMFVSVPKGDAMFMKVSVLPTPCVPRAKKEYYSVDLHLADIYIEALATPVKAEYLLVA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g01002 308 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 277 IPR029063 -
Pte16g01002 308 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Pte16g01002 308 Pfam O-methyltransferase domain 140 265 IPR001077 GO:0008171
Pte16g01002 308 Gene3D Vaccinia Virus protein VP39 116 271 IPR029063 -
Pte16g01002 308 FunFam Caffeic acid 3-O-methyltransferase 2 115 - -
Pte16g01002 308 Gene3D - 1 115 IPR036388 -
Pte16g01002 308 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Pte16g01002 308 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 308 IPR016461 GO:0008168
Pte16g01002 308 PIRSF O-mtase 1 270 IPR016461 GO:0008168
Pte16g01002 308 PANTHER O-METHYLTRANSFERASE 23 266 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g01002 Pte-Chr16 29408603 29410078 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g01002 1 265 Monolignol Biosynthesis Gene Families AT5G54160 70.566 1.96e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g01002 K13066 - zju:107414981 432.18