Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00997 ATGTTCGTGACTGTAAAGGTGAATGTTCCCAAGACAAAGAAGACATATTGCAAAAGCAAGGAGTGCAGGAAACACACCTTGCATAAGGTTACACAATACAAGAAGGGCAAGGACAGTCTTGCTGCTCAGGGTAAGAGACGGTATGATCGCAAGCAATCTGGATATGGAGGGCAAACTAAGCCTGTGTTCCACAAGAAGGCGAAAACAACCAAGAAGATTGTTCTGAGGCTACAATGCCAGGGATGTAAACATGTATCTCAGCATGCAATCAAGAGGTGCAAGCACTTTGAGATAGGTGGAGACAAGAAGGGCAAGGGAACATCTCTTTTTTAA 333 0.4414 MFVTVKVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00997 110 FunFam 60S ribosomal protein L44 6 110 - -
Pte16g00997 110 ProSitePatterns Ribosomal protein L44e signature. 68 79 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pte16g00997 110 MobiDBLite consensus disorder prediction 33 53 - -
Pte16g00997 110 Pfam Ribosomal protein L44 24 99 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pte16g00997 110 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 7 110 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pte16g00997 110 Gene3D - 6 110 - -
Pte16g00997 110 MobiDBLite consensus disorder prediction 33 62 - -
Pte16g00997 110 SUPERFAMILY Zn-binding ribosomal proteins 7 99 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00997 Pte-Chr16 29385085 29386013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00997 7 111 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 92.381 1.18e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00997 K02929 - ini:109182140 221.861