Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00995 ATGAAATTTATAAACTTTTCCAATGGGCTTTCAAAACCCATTTTTCTGTTTAGTCATCCCGAGCTGCATTTTCTGTCACCTGGTTATACCGTGTTGTCGGGTTCGACGCTCAACCTGCGGTTTCCGTGCGACCATGAGAGGAAGCTTGGGCTGTTTATGAAATGTCATTGTTATGTTGCTGATAGAACATCTACCTCTACTTCCGTAGATTTAAAACCAGGTTCTGCCCGGTCTGGTTCTAAACGAGGAGGTTCTTCATCATTATATCTTCGTCCTAGTTTAACTGAAATGAAGAAAGACATGCTGGCTAATCGTGCTAAGCTTTACGAATTCTTGAGGAGGATTGGGGTTGTTCCCGATGAGCTTGATGGGTTGGAGCTTCCTGTGAGTGTTGAGGTTATGAGGGAACGTGTGGATTTTCTTCATAAATTGGGGCTCACAGTTGAGGACATCAACAATTACCCTCTTGTTCTTGGATGCAGTGTGAAGAAAAACATGGTTCCTGTGCTTGATTATCTTGGTAAATTGGGTGTTAGGAAATCTACGATTTCACAGTTCTTGCGGAGGTACCCACAAGTCTTGCATTCTAGTGTCGTTATTGATCTCCAACCAGTGGTTAAGTATCTCCAAGGTTTGGATATCAAGCCTGTTGATATTCCTAGAGTCCTTGAGAAATACCCAGAAGTGTTAGGATTCAAGCTAGAGGGCACAATGAGTACATCGGTCGCTTATTTGGTGGCCATTGGTGTTGGAAGGAGAGAAATTGGAGGTGTTTTGACTAGATATCCAGAGATATTGGGGATGAGAGTTGGCAGAGTCATCAAACCTTTTGTGGAGTACCTGGAAAACCTGGGAATTCCAAAATTAGCTACCGCGAGACTCATAGAGAAGCGACCTCACATTCTTGGATTTGGATTAAAAGAGAAAGTGAAGCCCAATGTTGAATGTCTAGAAGAGTTTCATGTTAGAAAAATATCGCTGCCATCTGTAATTGCACAGTATCCTGAGATAATTGGAATTGACTTAAGGTCAAAGCTTATTAATCAACGTAATTTGCTCAATTCAATGCTTGATGTAAGTCCTCAGGATTTTGGTAAGATTGTTGAGAAGATGCCGCAGGTGGTAAGCCTCAGTACTGCAGCTGTGACGAAACATGTGAAGTTTTTAAAGGATTGTGGATTTTTGCCGCAACAAATGAGGATGATGGTTGTTGGATGTCCTCAGCTTCTAGCTCTTAATCTAGACATTATGGAACTTAGTTTTGATTACTTCCAAAAAGAAATGAAAAGGCCGCTGGATGACTTGGTGGTCTTCCCTGCATTTTTCACGTATGGTCTCGAGTCCACTGTGAAACCTCGGCATAGGATGGTTGCTAAGAAGAGCATAAAATGTTCTCTTGCCTGGATGCTTAATTGCTCGGATGAGAAGTTTGAGGAACGCATGACCTATGACACCATTGACATTGAGGAGATGGAGACAGAACCATCATTTGACATGAAATCACTTATGGAACCAAGGCATGATGATTCAGGTTCTGATTACGAGGAGGATAGTGATTACGATGATGAATAA 1572 0.4192 MKFINFSNGLSKPIFLFSHPELHFLSPGYTVLSGSTLNLRFPCDHERKLGLFMKCHCYVADRTSTSTSVDLKPGSARSGSKRGGSSSLYLRPSLTEMKKDMLANRAKLYEFLRRIGVVPDELDGLELPVSVEVMRERVDFLHKLGLTVEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTISQFLRRYPQVLHSSVVIDLQPVVKYLQGLDIKPVDIPRVLEKYPEVLGFKLEGTMSTSVAYLVAIGVGRREIGGVLTRYPEILGMRVGRVIKPFVEYLENLGIPKLATARLIEKRPHILGFGLKEKVKPNVECLEEFHVRKISLPSVIAQYPEIIGIDLRSKLINQRNLLNSMLDVSPQDFGKIVEKMPQVVSLSTAAVTKHVKFLKDCGFLPQQMRMMVVGCPQLLALNLDIMELSFDYFQKEMKRPLDDLVVFPAFFTYGLESTVKPRHRMVAKKSIKCSLAWMLNCSDEKFEERMTYDTIDIEEMETEPSFDMKSLMEPRHDDSGSDYEEDSDYDDE* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00995 523 SMART mt_12 328 360 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 184 215 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 365 395 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 400 431 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 SMART mt_12 432 463 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 PANTHER CGI-12 PROTEIN-RELATED 291 481 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 FunFam Transcription termination factor MTERF4, chloroplastic 272 486 - -
Pte16g00995 523 FunFam Transcription termination factor mterf4, chloroplastic 134 271 - -
Pte16g00995 523 Gene3D Transcription termination factor 3, mitochondrial 150 274 IPR038538 -
Pte16g00995 523 Gene3D Transcription termination factor 3, mitochondrial 275 486 IPR038538 -
Pte16g00995 523 Pfam mTERF 170 478 IPR003690 GO:0003690|GO:0006355
Pte16g00995 523 MobiDBLite consensus disorder prediction 490 523 - -
Pte16g00995 523 MobiDBLite consensus disorder prediction 66 87 - -
Pte16g00995 523 MobiDBLite consensus disorder prediction 490 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00995 Pte-Chr16 29356369 29358919 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte16g00995 mTERF 9.8e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00995 K15031 - qsa:O6P43_020032 780.015