Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00992 ATGGCTGTGGATAGCTTGAAGAAATGGTTTAAGGGGTCAAAGCCTGTGCTGAGCATGTTGCTAGTACAAGTTTTTGTATCAGGGATGCAACTGTTATCTAGGGTTGTGTTGACTGAAGGCATTTTCATTCTGGCTCTCATTGCCTACCGTCATGTTGTTGCTGCTCTTTGCATGGTTCCTTTTGCATTCTATTTTGAAAGAGATGCTGTGAAGAAGATGAGGTTGTCTGTTTGGTTCTGGCTCTTCCTTAACTCATCAGTTGGGATAACAATGGCAATGGGATTTTACTATTATGGTCTTCGGGATACCTCAGCTACATATTCGATCAATTTCCTCAACTTGCTTCCTGTGTGTACTTTTCTCGTCTCTATCATTCTCAGATTGGAGAAAGTGGGCCTAAGAAAATTTCCAGGTAAAATCATGACCTTAGGAGCAATTCTCTGTGTGGGAGGAGCATTATGTACAAGTCTTTATCAGGGAAAGGCCTTCTACATTCGACATCACAGTGTCAGAACTCATAACATGTCAGAAACACATGAGACTAACTGGGGCCGTGGTACTATATTTTTGATTTCCAGCTGCTTGTCCTTGACTGCATGGTACCTTATCCATGTTAAGTTGTTCAAATTGTTCCCTTGTAAGTATTGGACAACCATGTTAACATGCACCATAGCTTCTGTGCAAGCAACAGCTGTAGGCTTGTGCATAAACAGAGAAAAAACTGCATGGGAGATAGGATGGAATCTTCAGCTGCTTACAATTGTCTACTCGGGAGCATTAGCAACAGCAGCCACATACTGCTTAATATCATGGACAATCGCAATTCAAGGACCGACATATCCCCCAATGTTTAATCCACTGGCACTTATATTCGTAGCCTTCTCAGAAGCCATTATTCTGGGTGAACCTCTCAGACTTGGAACTGTACTGGGGATGGTGTTGATCATACTTGGTTTGTACAGTTTCTTATGGGGTAAAACAAGACAGATGAAAAGCACGTCTCAAGAAAATGTAGTAACAGGCAAATTTGACATTATTGAATCTGCTGCAGCACAAGTTTCAGCAATTGTAGTACCCAGCACTTCTCCTAGCAGCAGTGAAGGACAAGAAGCTAATAATGACATTGAGAAAGCTTGA 1137 0.4178 MAVDSLKKWFKGSKPVLSMLLVQVFVSGMQLLSRVVLTEGIFILALIAYRHVVAALCMVPFAFYFERDAVKKMRLSVWFWLFLNSSVGITMAMGFYYYGLRDTSATYSINFLNLLPVCTFLVSIILRLEKVGLRKFPGKIMTLGAILCVGGALCTSLYQGKAFYIRHHSVRTHNMSETHETNWGRGTIFLISSCLSLTAWYLIHVKLFKLFPCKYWTTMLTCTIASVQATAVGLCINREKTAWEIGWNLQLLTIVYSGALATAATYCLISWTIAIQGPTYPPMFNPLALIFVAFSEAIILGEPLRLGTVLGMVLIILGLYSFLWGKTRQMKSTSQENVVTGKFDIIESAAAQVSAIVVPSTSPSSSEGQEANNDIEKA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00992 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 149 - -
Pte16g00992 378 PANTHER WAT1-RELATED PROTEIN 14 334 IPR030184 GO:0016020|GO:0022857
Pte16g00992 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Pte16g00992 378 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Pte16g00992 378 Pfam EamA-like transporter family 15 149 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00992 Pte-Chr16 29345211 29348778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00992 14 339 Nodulin-like Gene Family AT1G44800 34.639 4.67e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00992 - - gmx:100780316 473.011