Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00972 ATGGAAGTGTTCTCTTTGCTGAAGATAGTTTCTTCACTAGCTCTTGGAGGTGTAACGTGCTTCCTATTTTACATGTGCACCAGTGTGTGGCAAGAAGCTCAAAGGGTTAGGAGGAAGCTCAAAGCACAAGGTGTCAAAGGTCCTAAGCCTTCTTTTCTATATGGGAATCTGCCTGATATGCAGAAATTTCAAAAGCAAGCCAAGTCATTGAAGGCTTCAAATCATTCTGAAGCAATAGCACATGATCATGATTACACGACTGAACTCTTTCCATACTTCGAATGCTGGAGAAAAGAATTTGGTTGTGTATACACCTACTCAACTGGGATGAAGCAACACTTGTACATAAACCAGCCAGAGCTGGTGAAGCAAATGAGCCAGTGCAAAAGTTTGGAATTAGGTAAGCCTTCTCATGTGACAAAGAGACTGGCACCATTGCTAGGTAATGGCATTTTGAGAAGCAATGGCCTAACATGGTCGCAGCAGCGGAAAATCATAGCACCCGAATTCTTCACGGACAAAGTTAAGGGTATGGTGGGGCAAATGGTAGAGTCAGCACTGCCCTTGCTGAGAAAATGGGAGGAGTGTATTGATGTCAATGGAGGTATAACAGCTGAAATTAAAGTGGACGAGGACTTAAAGTGTTTCTCAGGGGATGTCATATCAAGAGTTTGCTTTGGTAGTTCTTACATCAAGGTGAAGGAGATTTTCTCAAAGCTGGGGCTTCTTACTAAGGCCATTTCCAACCAAGGGTTTCTTTCCATTGTCAGTGGTGTCAGTGGGAAACTTTTCCCTACAAAAGCTCAGAAGGAAATCAAAAGTTTGGAGAGTGAGATGGAGTCTATGATATGGGAATCAGTGAAAGAAAGACAGAGAGAATGTGCCATTATATCATCAGCGAAATCATACAAGGATTTGATGCAGTTAATATTGGAGAGTGCTCTCTCAGACAAGAGTCTAGGGAAGCATTTATCCAAGAGTTTCGTAGTTGACAACTGCAAGAACATATACTTTGCTGGACATGAGACAACTGCTATTGCTGCCTCTTGGAGTTTGATGCTTCTTGCATCACATCCAGAATGGCAAGACCGCATAAGGGCAGAGTTCGCTCAATATTGCCCCAATGGCCTTCCTGATGCAGATTCATTGCCGCACTTGAAAGTGGTTGCTATGGTGATTCAAGAAGTCATACGTCTATATCCACCAGCTGCATTTATATCGAGGGAGGCACTGCAAGATATACAGATAGGTAACCTTCAAGTACCGAAAGGTGTATCTTTATGGACTCTAATCCCAACACTGCACCGGGATATTGATATCTGGGGAACAGATGCAAATGAGTTCAAACCAGAAAGGTTCAAGGATGGAGTTGCCAAAGCCTGCAAATACCCTCAAGCTTATATTCCATTCGGATTAGGTCCTCGGTTATGCTTGGGAAGGAACTTTGCCATGGTGGAGTTGAAGATTCTCTTGTCACTTGTTATCTCCAAATTTGCGTTCTCTCTCTCCCCCAACTACAGGCACTCTCCTGCTTATAGAATGATTGTAGAACCAGGACATGGGGTACAGATTATCATTCAAAAGGTTTAA 1590 0.4302 MEVFSLLKIVSSLALGGVTCFLFYMCTSVWQEAQRVRRKLKAQGVKGPKPSFLYGNLPDMQKFQKQAKSLKASNHSEAIAHDHDYTTELFPYFECWRKEFGCVYTYSTGMKQHLYINQPELVKQMSQCKSLELGKPSHVTKRLAPLLGNGILRSNGLTWSQQRKIIAPEFFTDKVKGMVGQMVESALPLLRKWEECIDVNGGITAEIKVDEDLKCFSGDVISRVCFGSSYIKVKEIFSKLGLLTKAISNQGFLSIVSGVSGKLFPTKAQKEIKSLESEMESMIWESVKERQRECAIISSAKSYKDLMQLILESALSDKSLGKHLSKSFVVDNCKNIYFAGHETTAIAASWSLMLLASHPEWQDRIRAEFAQYCPNGLPDADSLPHLKVVAMVIQEVIRLYPPAAFISREALQDIQIGNLQVPKGVSLWTLIPTLHRDIDIWGTDANEFKPERFKDGVAKACKYPQAYIPFGLGPRLCLGRNFAMVELKILLSLVISKFAFSLSPNYRHSPAYRMIVEPGHGVQIIIQKV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00972 529 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 SUPERFAMILY Cytochrome P450 85 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 Gene3D Cytochrome P450 29 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Pte16g00972 529 Pfam Cytochrome P450 87 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte16g00972 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 26 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00972 Pte-Chr16 29202518 29206191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00972 121 524 Cytochrome P450 AT5G24900 56.724 2.47e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00972 K20661 - gmx:100815776 733.791