Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00965 ATGGTTTCCACTCAATTTTTTGCGATGAATGAGAATGTTGGACAAAAGCAGCAGTTTCGGGGTCAGATGATATTAAGAAATGATCCATTTGCTGAGTTTGTATTCTCTGAGTTGTTTGATAAAGTTCCAGCTCAAACCCAAATAGAACTCAACAATGAGAATCTTAAAGATTTAAACTTGTCAGTAACTGATCCAAGTGAATCGTTTGATGATGACCTTGTCACGCAATTAATATCAAAACACATTGAAACGGAAACAAATAGGGGAGAAGATTCATGGGAGGATGTCGAGGGAATTTGTGATGGAAAGCATGATGATTCTGAAGGAGTTGTATTCAATGAACTATGCACGAACCGCCATACTGTCGGAGTTGACAATTTTGAAGTTCTGAAAGTTGTTGGTCAAGGCGCGTTTGGAAAAGTGTACCAGGTTAGGATGAAATGTACCTCTGTAATATACGCAATGAAGGTGATCAACAAGGATAGGATCATAAAGAAAGGTCAAGTTGGGTATATATTATCCGAAAGGGAGATATTGAGGAAAGTGGATCACCCCTTCATTGTGCAGCTGAGATACTCATTCCAGACCAAGTATAGATTCTACCTTGTGCTAGATTTCATAAACGGCGGTCACCTTTTCTTTCAGCTCCAACACCAAGGGCTTTTCCGGGAGGTTTTGGCACGTGTCTATGCCGCAGAGATTGTTTCTGCAGTTTCACATCTACACAACCGTGGCATAATGCACAGAGATATCAAGCCTGAAAACATCCTCCTTGATGCAGATGGTCATGTGGTGTTAACTGATTTCGGCCTGGCTTGTGAGAGGGAAAGATCAAATTCCATCTGTGGAACTGCAGAATACATGTCGCCAGAAATTGTACAGGGTAAAAGCCATGACAAGTCTACTGATTGGTGGAGTGTAGGAATCTTACTATATCAAATGCTTACTGGGAAGCTTCCTTACACAGGAGGAAACAGATATAAAATCCAGCAAAAGATAATAAAGGAAAAGATCAAGCTTCCGGGATTTTTGTCAAGTGAAGCACACTCTTTGCTCAAAGGGCTTTTGCAGAAAGAAGCCAGCAAACGATTAGGAAATGGACCTAATGGAGTTGAGGAGATAAAAAGACACAAGTGGTTTAAGTCGATCAACTGGAAGAAATTGGAGAGTAGGGATATTACACCTTGCTTTGTCCCCAAAGTTTCTGGAAAACATTGTGTGGCCAACTTCGATGATCGATGGACCAATATGTCTGTCTGTGATTCTCCATCTGGTATCCCCAAAACCAATGACAACTACTTCAAGGGGTTTACTTTCATCAGATCTCCAATGTAG 1335 0.409 MVSTQFFAMNENVGQKQQFRGQMILRNDPFAEFVFSELFDKVPAQTQIELNNENLKDLNLSVTDPSESFDDDLVTQLISKHIETETNRGEDSWEDVEGICDGKHDDSEGVVFNELCTNRHTVGVDNFEVLKVVGQGAFGKVYQVRMKCTSVIYAMKVINKDRIIKKGQVGYILSEREILRKVDHPFIVQLRYSFQTKYRFYLVLDFINGGHLFFQLQHQGLFREVLARVYAAEIVSAVSHLHNRGIMHRDIKPENILLDADGHVVLTDFGLACERERSNSICGTAEYMSPEIVQGKSHDKSTDWWSVGILLYQMLTGKLPYTGGNRYKIQQKIIKEKIKLPGFLSSEAHSLLKGLLQKEASKRLGNGPNGVEEIKRHKWFKSINWKKLESRDITPCFVPKVSGKHCVANFDDRWTNMSVCDSPSGIPKTNDNYFKGFTFIRSPM* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00965 444 FunFam Non-specific serine/threonine protein kinase 124 228 - -
Pte16g00965 444 Gene3D Phosphorylase Kinase; domain 1 125 420 - -
Pte16g00965 444 FunFam Non-specific serine/threonine protein kinase 207 399 - -
Pte16g00965 444 Pfam Protein kinase domain 127 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00965 444 SUPERFAMILY Protein kinase-like (PK-like) 124 431 IPR011009 -
Pte16g00965 444 Pfam Protein kinase C terminal domain 401 439 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte16g00965 444 PANTHER RIBOSOMAL PROTEIN S6 KINASE 76 442 - -
Pte16g00965 444 ProSiteProfiles AGC-kinase C-terminal domain profile. 381 444 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte16g00965 444 Gene3D Transferase(Phosphotransferase) domain 1 207 399 - -
Pte16g00965 444 SMART serkin_6 127 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00965 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pte16g00965 444 ProSiteProfiles Protein kinase domain profile. 127 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00965 444 ProSitePatterns Protein kinases ATP-binding region signature. 133 166 IPR017441 GO:0005524
Pte16g00965 444 CDD STKc_AGC 133 380 IPR045270 GO:0004674|GO:0005524
Pte16g00965 444 SMART pkinase_C_6 381 441 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00965 Pte-Chr16 29168806 29170906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00965 122 443 AGC Kinase Gene Family AT3G08720 71.254 7.64e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pte16g00965 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00965 K04688 - pvy:116137386 506.908