Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00952 ATGATGGAAATGAAGAATTCAGATCCATCAGGATCTGGTTCGAGTTTCGAGGAGCAACGACAACTGGTGCCGCTCGCTCACCATCAGCCTCAGGGTTCAACCATGTCTTTTCCAAATCGAACCCTTCCTCAAAGGGGTTCTCACCACCGCCGGGCACACTCCGAAGTGCATTTTCGTTTACCTGACGACCTTGATCTGGACCTGGATCCGTTCGACATGCCTTCTGCGACTTTCGAGGATCTCGGATCAGACCTCGACCTTTTTTCCACCTATATGAATATTGGGAAGCTTGGATCCAAACCCGAAGATCAACCCTTCGGATCTCTCTTAAACAAACCCCACACTGGAACCAACGTTGCCTCAACGACTGCCGCCAATGCTGGTAGTGGCGGTGTTGGTAGTTTGGAGCTGGAGAATCGCGACAGTGAGAAAAACGGGAAACCCAGGCAAATTCATAATAATTTGATGGATGGGTGTTCCTCACTGGAGAGCATTGAGGCCAAGAAAGCCATGGATCCTGATAAGCTTGCTGAATTGTGGACCGTTGATCCCAAGCGAGCCAAGAGGGTTCTGGCTAATCGGCAATCTGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATGTTAGAACTCGAAAGAAAAGTTCAAAACCTTCAAACGGAAGCAACTACTCTTTCTGCCCAATTGCATCTTTTTCAGAGAGATACATCTGGTTTGACTACTGAAAATACAGAGCTTAAGCTTCGTTTACAAGCCATGGAGCAACAAGCTCAGTTACGGGATGCTCTTAATGAAGCTCTAAAGAAAGAAGTTGAAAGACTGAAAGATGCAACAGGAGAGACAATGACTCCTACTGATACTTACAGTTTGGGCATGCATCCCTTCAGCCAACCTTCCTTCTCGCATCAGCCACGGTATGGTCTAGGAGAAGCGCCAAACATACAAAGACAGCAGCAAAAGTTCCATCCATATGTCTCTAACATGTCTACTCCTCATCAGCCTTTGCATGCCACCCCACATGACTCATCAAAAATGCTGCAGCATGACCCCATTGGCCAATTTCAGGGACTCGAGATAAGCAGCCGTGGCTCACACATCGTGAGAACTTAA 1110 0.4739 MMEMKNSDPSGSGSSFEEQRQLVPLAHHQPQGSTMSFPNRTLPQRGSHHRRAHSEVHFRLPDDLDLDLDPFDMPSATFEDLGSDLDLFSTYMNIGKLGSKPEDQPFGSLLNKPHTGTNVASTTAANAGSGGVGSLELENRDSEKNGKPRQIHNNLMDGCSSLESIEAKKAMDPDKLAELWTVDPKRAKRVLANRQSAARSKERKARYMLELERKVQNLQTEATTLSAQLHLFQRDTSGLTTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKDATGETMTPTDTYSLGMHPFSQPSFSHQPRYGLGEAPNIQRQQQKFHPYVSNMSTPHQPLHATPHDSSKMLQHDPIGQFQGLEISSRGSHIVRT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00952 369 Coils Coil 201 228 - -
Pte16g00952 369 CDD bZIP_plant_RF2 186 235 IPR044759 GO:0003700|GO:0006355
Pte16g00952 369 MobiDBLite consensus disorder prediction 104 154 - -
Pte16g00952 369 MobiDBLite consensus disorder prediction 1 20 - -
Pte16g00952 369 FunFam probable transcription factor PosF21 184 237 - -
Pte16g00952 369 Coils Coil 249 280 - -
Pte16g00952 369 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 27 343 - -
Pte16g00952 369 MobiDBLite consensus disorder prediction 110 129 - -
Pte16g00952 369 SUPERFAMILY Leucine zipper domain 185 236 IPR046347 GO:0003700|GO:0006355
Pte16g00952 369 Gene3D - 185 237 - -
Pte16g00952 369 MobiDBLite consensus disorder prediction 27 43 - -
Pte16g00952 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 246 IPR004827 GO:0003700|GO:0006355
Pte16g00952 369 SMART brlzneu 181 245 IPR004827 GO:0003700|GO:0006355
Pte16g00952 369 Pfam bZIP transcription factor 185 241 IPR004827 GO:0003700|GO:0006355
Pte16g00952 369 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00952 Pte-Chr16 29047729 29050561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00952 43 369 bZIP Transcription Factor Family AT2G40620 52.260 5.86e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte16g00952 bZIP_1 4.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00952 - - qsa:O6P43_020104 404.831