Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g00946 | ATGGCCACTGCATGTCGAATCTGTGCGCCTCCTTCTGTTACTGGGTTTGGTTATTTGCAGAGGCGCAACATAGGCATTGACTGTCCAGTTAAAGGTGTAACCGGTAAGAAGATGGATGACGAGGTTGAGTTAGGAGCGACAGTTCCTGAATCAGCCACAAAGCAAAGTAGCACATTGGCAATTGGTTCAAGTAGTTATGGGAGTAATCCACCTTGGTCTAACAATTCCAGTTCTGCAAGCAGTTTGGTGAGATTGTTTCAACAATTTGGTGAGATTGTGATGGCCAAAGATATTAAGGACCGTGCAACCAATCTGAGTAAAGGTTATGGTTTTGTCAAGTATGCTGATATCCAAATGGCCAATAATGCTATTATGGCTATGAATGGTTATCAACTTGAAAGACGGACTATAGAGGTGAGAGTTGTTGGCAAACCACCTCAGCCAACTGTACCTCCTGGTCCTCCAGCATCTGCATTGGCATCAACGTATCCTGTTGCAAGCCAAGCAGTTGCGACATATTCATCTCAGCAATATGCAGCTGGTGGTCCCTAG | 552 | 0.4493 | MATACRICAPPSVTGFGYLQRRNIGIDCPVKGVTGKKMDDEVELGATVPESATKQSSTLAIGSSSYGSNPPWSNNSSSASSLVRLFQQFGEIVMAKDIKDRATNLSKGYGFVKYADIQMANNAIMAMNGYQLERRTIEVRVVGKPPQPTVPPGPPASALASTYPVASQAVATYSSQQYAAGGP* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g00946 | 183 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 57 | 144 | IPR000504 | GO:0003723 | |
Pte16g00946 | 183 | SMART | rrm1_1 | 58 | 140 | IPR000504 | GO:0003723 | |
Pte16g00946 | 183 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 80 | 137 | IPR000504 | GO:0003723 | |
Pte16g00946 | 183 | PANTHER | TRANSFORMER-2-RELATED | 80 | 142 | - | - | |
Pte16g00946 | 183 | SUPERFAMILY | RNA-binding domain, RBD | 78 | 153 | IPR035979 | GO:0003676 | |
Pte16g00946 | 183 | Gene3D | - | 36 | 141 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g00946 | Pte-Chr16 | 29009145 | 29010270 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g00946 | 46 | 149 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 30.000 | 6.38e-06 | 43.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g00946 | K13095 | - | gmx:100800982 | 185.267 |