Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00942 ATGACCTTCAAGCGCAGGAACGGAGGACGCAACAAGCACGGCCGTGGTCATGTCAACTTCATCCGCTGCTCCAACTGTGGCAAATGCTGTCCAAAGGATAAGGCCATCAAGAGGTTCCTTGTGAGAAACATTGTTGAGCAAGCTGCCGTGAGAGATGTTCAAGAAGCATGTGTCTATGAACAGTACACTCTCCCAAAGCTGTATGTGAAGATGCAGTACTGTGTCTCATGTGCCATTCACTCCCATGTTGTGAGGGTTCGATCTAGCACTGACAGGAGGAACCGTGCCCCTCCACAGCGTTTTGCTAGGCGTAGGGACGATGCACCAAGGCCTGGTCAGCCTGGAGCCCCTGGACAAGTACCTCGTGCTCCTGGAGCTGGAGCTCCTGCCCATGCGTAA 399 0.5363 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSSTDRRNRAPPQRFARRRDDAPRPGQPGAPGQVPRAPGAGAPAHA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00942 132 MobiDBLite consensus disorder prediction 86 110 - -
Pte16g00942 132 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte16g00942 132 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte16g00942 132 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pte16g00942 132 FunFam 40S ribosomal protein S26 1 114 - -
Pte16g00942 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 113 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte16g00942 132 MobiDBLite consensus disorder prediction 86 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00942 Pte-Chr16 28925165 28928225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00942 1 115 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 85.217 1.15e-69 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00942 K02976 - gmx:100784958 187.193