Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00933 ATGGATGTTTCAAGATGGATCTTAGGAATGATAAACAAAGTAAATGGACAACTAGAAGAAGCAAACTTTCTTGGAGAAATGGTCTCAGCTTTCAAAGAACAAATCCACTCAGACATACTCGTCATCCCTGGCAATGGCGGACCTTCGATACCTGCACATAAGGCCATTCTGGCAGTTAGATCAGAAATATTTAAGAATATGCTTGAATGTGATGAATTCAAAGCTGCACCAATACCAAACAGCACCATAACACTAGCAGAGTTAAACCATGAAGAGTTGGAATGTTTGCTGGAATTTCTTTACAATGGACGAGTAACTAAGGAACGATTAGACAAGCATGTCTATACAATGTTGCATACAGCAGATAAGTACGAAATTCCATATTTGCAGAAACTATGTGAAGGCCATATGCTTGATTCTTTGAATGTTTCCAATGCCCTTGATGTGTTGGAGGCCTCAGATATTTGTTCGAATCAAGAATTGAAGGACACAACAATAAATTTTATTGTGAAAAATATGGAGGAAATTGTTTTCTCAAGTAAGTATGATGTGTTTGCTCTCAAGAGTCCCCATTTGAGTGTACAGATTACAAGGGCGACATTGAAGACCTTAAAAAAACACTGA 624 0.375 MDVSRWILGMINKVNGQLEEANFLGEMVSAFKEQIHSDILVIPGNGGPSIPAHKAILAVRSEIFKNMLECDEFKAAPIPNSTITLAELNHEELECLLEFLYNGRVTKERLDKHVYTMLHTADKYEIPYLQKLCEGHMLDSLNVSNALDVLEASDICSNQELKDTTINFIVKNMEEIVFSSKYDVFALKSPHLSVQITRATLKTLKKH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00933 207 Gene3D Potassium Channel Kv1.1; Chain A 12 140 IPR011333 -
Pte16g00933 207 SUPERFAMILY POZ domain 22 140 IPR011333 -
Pte16g00933 207 SMART BTB_4 37 141 IPR000210 GO:0005515
Pte16g00933 207 Gene3D - 141 207 - -
Pte16g00933 207 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 3 205 IPR044784 -
Pte16g00933 207 Pfam BTB/POZ domain 31 139 IPR000210 GO:0005515
Pte16g00933 207 CDD BACK 142 179 - -
Pte16g00933 207 ProSiteProfiles BTB domain profile. 37 109 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00933 Pte-Chr16 28803333 28804994 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte16g00933 BTB 5e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00933 K10523 - zju:125420065 235.728