Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00932 ATGAGAGTCCCTTCGGATTCGTCTGCTCTGTTGTGGGGTGTGGCCAGGTTTCATCCACATTGCCTACCACTTGGCACCACACATGGCTGGGAGCACAAGAAAGCAGTACTGCATGAGAAGCTGCAACTTCTTCGTTCCATTACGAACTCTCATGCTCTAAGCAAAACTTCGATCATAGTTGATGCATCGGAGTACATCAGAGAACTCAAGCAAAGAGTTGAAAGACTAAACCATGACATAGCAACTGCACAATCTTCAAGTGATCAACAAGATAATTCCCCTGTGGTGACGGTGGAAACCCTAGAAAAGGGATTTCTAATAAACGTCTTTTCAGAAAATAACTGCCCGGGTCTGCTTGTCTCCATATTGGAAGCCCTTGAACAGATGGGTTTGAATGTGCTGGAAGCCAGGATCTCATGTGATGACAGCTTTCGTTTTCAAGCAATCGGAGGAGACCATAATGAAGAAGAGAGCGAAAGTATTGATGCCAGTGCTGTGAAGCAAGGGGTGGCAGAAGCTATAAAGAACTGGAGTGAAAGCACTGGACAACAGTAA 555 0.4559 MRVPSDSSALLWGVARFHPHCLPLGTTHGWEHKKAVLHEKLQLLRSITNSHALSKTSIIVDASEYIRELKQRVERLNHDIATAQSSSDQQDNSPVVTVETLEKGFLINVFSENNCPGLLVSILEALEQMGLNVLEARISCDDSFRFQAIGGDHNEEESESIDASAVKQGVAEAIKNWSESTGQQ* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00932 184 Coils Coil 59 86 - -
Pte16g00932 184 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 33 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00932 Pte-Chr16 28791037 28798772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00932 37 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 32.258 7.63e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00932 - - tcc:18600910 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00932 16 28791037 28798772 Pte8g00796 8 31382570 31385320 RCT
Pte4g01253 4 43423142 43424922 Pte16g00932 16 28791037 28798772 RCT
Pte16g00932 16 28791037 28798772 Pte16g00932 16 28791037 28798772 RCT