Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00926 ATGGACGACAATGTTGTTGTCCGGAAGTGTTTTTCTCGGACTCTTCAGTTCCCGGTGACAAATATCAAAGATTGGCATTGCATTTCTAACGAGGAGGAGGAGAAATGGAAGATTCAGCTGATACCCCGCAACCCTTCTCAGTATTTGATCCATTTCTTTCTCTACATCAAATGTTTGGCGTTTCTTCTATTCTGTGTAAAACCTGCTTCATGTCAGGTCTGGGATGGGGTGGTTGTGACAGAAGAAAATTACCAAGCTTTGCAAGCATTCAAGCAAGAGCTGGATGATCCTAAAGGCTTTCTGAGAAGCTGGAATGATAGTGGCTATGGAGCTTGTTCTGGTGGTTGGGCTGGTATCAAGTGTGCTCAAGGACAAGTGATTGTTATCCAGCTCCCATGGAAGCATTTGGGTGGCCGTATCACTCAGAGAATTGGCGAGCTTCAAGGGCTAAGAAAAATTAGTCTCCATGATAATCTCATTGGCGGTTCAATCCCTTCATCATTGGGGTTCCTCCCTAACCTTAGAGGTCTTCAGCTCTTCAACAACAAACTCACTGGTTCTATCCCTCCGTCATTAGGTTCTTGTCTTTTGCTTCAAACTTTAGATTTGAGTAACAACTCTCTAACTAGTTCAATCCCTGAGAGTCTTGTGAACTCTACAAAGCTTTATAGGCTCAATTTGAGCTACAACTCCTTGTCGGGTCCAATCCCATTTAGTCTCACTCGTTCAACTCCTCTCATCTTTCTTTCTCTCCAACACAACAATCTATCTGGTTCAATCCCAAACACCTGGGGTGGGACACAGAAGAACAATGTTTTCAGACTCCAGTCACTGACACTAGATCATAATTTTTTCACTGGAAGTTTTCCTTCTTCTTTGGGAAGCTTGAGTGAGATACAAGAAGTTTCTATTAGCAACAATCAATTAAGTGGACCATTGCCAAAAGAGATAGGTAGTCTTTCAAGGTTGAAGACACTAGACCTTTCAAATAATGCCATAAATGGAAGCTTGCCTGGTACTCTCTCCAATTGGACCTCACTTATTTTGTTGAATATGGAGAACAACAAACTTGACGGTCAAATCCCAGCATCTCTAGATAGACTGCCTTATCTTAATGTTGTAAAGTTGAGGAGAAACCAAATTAGTGGTCAGATTCCTGTAACCATTGGAAACAGTTCCTCACTTACTCAACTTGATTTGTCGCAAAATAATCTCAGTGGAGAAATCCCTGCCTCACTTGGTAGTTTACCAAGTCTCAGGGTTTTCAATGTTTCCTACAATAATCTATCTGGTCCAGTTCCTACTTCTCTCTCCCAAAAATTCAACGCAAGCTCTTTCATGGGGAATATTCAGCTATGTGGGTACAGTTCCTCAACAAGATGTCCTTCCCAACCTGCAGTCCCTTCTCCATCTCCCCAGGTATCACTACCCCATCACAGAAAACTGAGTACGAAAGACATAATACTTATAATAGCCGGAGTACTTCTTATAATTTTGCTAGTGCTGTGTTGCATATTGCTGCTCTGCCTTTTAAGGAAAAGGGCAGCAGCAAAAGCAAATGGACGAGCCGCTGGAAGAGCTATACCTACAAGAACAGAGAAGGGGGTGCCTCCTACTGCAGAAGTTGAAGCAGGAGGAGAGGCTGGCGGTAAATTAGTCCATTTTGACGGACCAATTGCTTTTACAGCCGATGATCTTTTGTGTGCCACAGCAGAGATAATGGGGAAAAGCACATATGGAACTGTCTATAAAGCTACCCTGGAAGATGGAAACCAAGTTGCAGTCAAAAGATTAAGAGAGAAGATTACTAAAAGTCAGAGAGAGTTTGAAACTGAAGTCAACATTCTTGGTAAAATTCGACATCCAAATCTTTTGGCTCTAAGGGCTTATTACTTGGGCCCCAAAGGAGAGAAACTTCTGGTTTTTGATTACATTCCTAAAGGAAGTCTTGCTGCCTTTTTGCATGCTAGAGGACCAGAAACTCAAATCGATTGGCCAACAAGGATGAGAATAGCACAGGGCATAACAAGAGGCTTGTATTACCTCCACAACAATGAGAACATCATACATGGGAACCTTACATCCAGCAACGTCCTACTTGATGAGAACGCAAATGCGAAAATTTCGGATTATGGCCTTGCTCGTCTAATGACAGCGGCTGCTAGTTCTAACGTGATTGCCACTGCAGGAGCATTAGGCTATCGAGCACCTGAGCTGTCCAAGCTTAAGAAAGCAAACGCAAAAACTGATGTTTACAGCCTTGGTGTAATCTTACTGGAACTCCTAACCGGTAAGTCGCCGGGTGAGGCGATGAATGGCCTAGATTTGCCCCAATGGGTTGCTTCTATTGTAAAAGAAGAGTGGACGAATGAGGTCTTTGATGCAGAGTTGATGAGGGATCCATCGACAGTTGGAGATGAGTTGCTCAATACATTGAAGCTTGCTTTGCACTGTGTTGATCCTTCCCCATCAGCACGACCGGAAGTTCAGCAAGTACTTCAGCAATTGGAAGATATCAGACCAGAGAGATCAATTAGTTCGGCAGGTGATGATGTACCTGGTGCTCCCTCAACAACAAGCGAGTAG 2586 0.4331 MDDNVVVRKCFSRTLQFPVTNIKDWHCISNEEEEKWKIQLIPRNPSQYLIHFFLYIKCLAFLLFCVKPASCQVWDGVVVTEENYQALQAFKQELDDPKGFLRSWNDSGYGACSGGWAGIKCAQGQVIVIQLPWKHLGGRITQRIGELQGLRKISLHDNLIGGSIPSSLGFLPNLRGLQLFNNKLTGSIPPSLGSCLLLQTLDLSNNSLTSSIPESLVNSTKLYRLNLSYNSLSGPIPFSLTRSTPLIFLSLQHNNLSGSIPNTWGGTQKNNVFRLQSLTLDHNFFTGSFPSSLGSLSEIQEVSISNNQLSGPLPKEIGSLSRLKTLDLSNNAINGSLPGTLSNWTSLILLNMENNKLDGQIPASLDRLPYLNVVKLRRNQISGQIPVTIGNSSSLTQLDLSQNNLSGEIPASLGSLPSLRVFNVSYNNLSGPVPTSLSQKFNASSFMGNIQLCGYSSSTRCPSQPAVPSPSPQVSLPHHRKLSTKDIILIIAGVLLIILLVLCCILLLCLLRKRAAAKANGRAAGRAIPTRTEKGVPPTAEVEAGGEAGGKLVHFDGPIAFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITKSQREFETEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYIPKGSLAAFLHARGPETQIDWPTRMRIAQGITRGLYYLHNNENIIHGNLTSSNVLLDENANAKISDYGLARLMTAAASSNVIATAGALGYRAPELSKLKKANAKTDVYSLGVILLELLTGKSPGEAMNGLDLPQWVASIVKEEWTNEVFDAELMRDPSTVGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEDIRPERSISSAGDDVPGAPSTTSE* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00926 861 Pfam Leucine rich repeat N-terminal domain 84 121 IPR013210 -
Pte16g00926 861 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 266 465 - -
Pte16g00926 861 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 274 839 - -
Pte16g00926 861 Pfam Leucine Rich Repeat 198 217 IPR001611 GO:0005515
Pte16g00926 861 FunFam Pollen receptor-like kinase 1 645 849 - -
Pte16g00926 861 FunFam Leucine-rich repeat receptor-like protein kinase 553 644 - -
Pte16g00926 861 Gene3D Phosphorylase Kinase; domain 1 552 644 - -
Pte16g00926 861 Gene3D Transferase(Phosphotransferase) domain 1 645 851 - -
Pte16g00926 861 SMART LRR_typ_2 198 219 IPR003591 -
Pte16g00926 861 SMART LRR_typ_2 320 343 IPR003591 -
Pte16g00926 861 SMART LRR_typ_2 171 195 IPR003591 -
Pte16g00926 861 SMART LRR_typ_2 416 440 IPR003591 -
Pte16g00926 861 Gene3D Ribonuclease Inhibitor 79 272 IPR032675 -
Pte16g00926 861 SUPERFAMILY L domain-like 120 462 - -
Pte16g00926 861 CDD STKc_IRAK 574 839 - -
Pte16g00926 861 SUPERFAMILY Protein kinase-like (PK-like) 572 839 IPR011009 -
Pte16g00926 861 Gene3D Ribonuclease Inhibitor 273 464 IPR032675 -
Pte16g00926 861 PRINTS Leucine-rich repeat signature 320 333 - -
Pte16g00926 861 PRINTS Leucine-rich repeat signature 198 211 - -
Pte16g00926 861 FunFam Leucine-rich repeat receptor-like protein kinase 80 238 - -
Pte16g00926 861 MobiDBLite consensus disorder prediction 838 861 - -
Pte16g00926 861 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Pte16g00926 861 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Pte16g00926 861 Coils Coil 860 861 - -
Pte16g00926 861 ProSiteProfiles Protein kinase domain profile. 568 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00926 861 Pfam Protein tyrosine and serine/threonine kinase 571 836 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00926 Pte-Chr16 28674236 28677343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00926 74 841 Receptor kinase-like Gene Family AT3G51740 66.279 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte16g00926 PK_Tyr_Ser-Thr 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00926 - - qsa:O6P43_013796 1203.73