Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte16g00918 | ATGTACGGGACCAAGTACCCGAAGGTGGACATGGCTGTGATGATACAAGTCAAAAACATCGTAGACATGGGCGCCTACGTCTCACTCCTCGAGTACAATAACATCGAGGGAATGATCTTGTTCCCTGAGCTCTCCCGCCATCAGATTTGTAGTGTTAGTAGTCTCATCAAGGTTCAGGCACATTAG | 186 | 0.4785 | MYGTKYPKVDMAVMIQVKNIVDMGAYVSLLEYNNIEGMILFPELSRHQICSVSSLIKVQAH* | 62 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte16g00918 | 61 | Gene3D | - | 1 | 61 | IPR012340 | - | |
Pte16g00918 | 61 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 | 1 | 59 | IPR011488 | GO:0003723|GO:0003743 | |
Pte16g00918 | 61 | Pfam | S1 RNA binding domain | 7 | 47 | IPR003029 | GO:0003676 | |
Pte16g00918 | 61 | SUPERFAMILY | Nucleic acid-binding proteins | 5 | 58 | IPR012340 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte16g00918 | Pte-Chr16 | 28515982 | 28516167 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte16g00918 | 1 | 58 | Eukaryotic Initiation Factors Gene Family | AT2G40290 | 86.207 | 8.44e-23 | 84.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte16g00918 | K03237 | - | lja:Lj0g3v0234959.1 | 98.9821 |