Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00918 ATGTACGGGACCAAGTACCCGAAGGTGGACATGGCTGTGATGATACAAGTCAAAAACATCGTAGACATGGGCGCCTACGTCTCACTCCTCGAGTACAATAACATCGAGGGAATGATCTTGTTCCCTGAGCTCTCCCGCCATCAGATTTGTAGTGTTAGTAGTCTCATCAAGGTTCAGGCACATTAG 186 0.4785 MYGTKYPKVDMAVMIQVKNIVDMGAYVSLLEYNNIEGMILFPELSRHQICSVSSLIKVQAH* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00918 61 Gene3D - 1 61 IPR012340 -
Pte16g00918 61 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 1 59 IPR011488 GO:0003723|GO:0003743
Pte16g00918 61 Pfam S1 RNA binding domain 7 47 IPR003029 GO:0003676
Pte16g00918 61 SUPERFAMILY Nucleic acid-binding proteins 5 58 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00918 Pte-Chr16 28515982 28516167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00918 1 58 Eukaryotic Initiation Factors Gene Family AT2G40290 86.207 8.44e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00918 K03237 - lja:Lj0g3v0234959.1 98.9821