Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00914 ATGGAGAGTGACCCTTTTGGTGCTTTGTCCAATTGGATTGACGGTGAACTCGCGGTTAATCCATGTTCTTGGTCGGGAGTTGAGTGCTCTGAGGGAAAAGTTGTTGCCTTGAATCTGAAAGATCTGTGTCTTCGAGGTACATTACCACCAGAGCTTGCAAATCTTGCACACGTAAAATCTATTATTCTGCGGAACAACTCCTTCTTTGGAACTATCCCAGAAGGAATGGGGATGTTGACAGAATTAGAGTTTCTAGATTTGGGATATAACAACTTAAGCGGACCATTGCCAATTGATTTTGGCAATAACCTGTCGCTGGCAATACTCCTGTTAGATAACAATGATCTGCTTGGAGGTGTGCCTCCTGAGATTTATGAATTAGCTGCACTTTCTGAATGTCAAGTAGATGAAAGCATATTGTCTGTGGCTCCTAAAGTACAATCTTGCAACCGAAGACCCTCTCCATGGAATATTGATCAAGATATGAAAGGAGTAGGTCAGCGGAGACTGCAACAGTTCGAAATGCGACAATCACCGTGGAACCGTGAAACCCAGCCCCCTCCAACAGAAACACCAGATAATAAACCATCACCATCAAATGATCCTATTGTGTCAGATGGGCCTGCATTTCCTCCTATTGAATCTTCTCCTTCACCCTTCCCTGTTGTAAATTCAACTGCGTCACGAGACCCAAGATCAGCTCCCTCTCCCACAACAACTTCTCCTTCTGTTCCCAATCGTGCTCAACCAGTTAAGACGACTTCTCTAAAGCATTGGGCTGCACTAGTTGGAGGTATAGGTGGTGCAGTACTTTTTGTGGTATTCACTGGTGTGTATCTCTGTAAAAGTGACAAGGTAGCTACTGTCAAACCTTGGGCTACTGGATTAAGTGGACAACTGCAGAAGGCTTTTGTGACCGGTGTGCCAAAGCTAAAGAGATCTGAACTTGAAGCAGCTTGTGAAGATTTCAGCAATGTCATCGGTACTTCACCAATTGGGACTGTATACAAGGGGACTTTATCAAGTGGGGTTGAAATAGCTGCTGCATCAATGACAGTGACATCTAATAAATGGTCAAAGAACTTGGAAGCACAATTTAGGAAGAAGGTAGAGATGTTATCAAAGGTGAACCACAAAAATTTCATCAATCTTCTTGGATATTGTGAAGAAGAGGAACCTTTCACAAGAATGGTGGTCTTTGAATATGCCCCAAATGGAACACTCTTTGAGCACTTACATATAAAAGAATCCGAGCACTTGGATTGGTTAACAAGAATGAGGATAGCCACGGGAATGGCATATTGCCTGCAGCATTTGCACCAGCTAAACCCCCCTAGTGCCCACAGTAATTTAAATTCTTCATCTGTTTATCTCACCGAGGATTATGCTGCCAAACTCTCAGAGTTAAGTTTCTGGAATGAGATAACTTCAGCTGAGAGGAAGGCCACCGGGAGCAAACGCTTAATTGCACCGTCAGGAGGTCTTAAAAGCAATGTCTATAGCTTTGGTGTCATATTGTTTGAAATGGTAACAGGCCAACTGCCTTACTCAGCGGACGATAGCTCACTTGATGATTGGGCATCAAACTATCTCAGACGCGACCATCCCCTCAGAAAGATGGTTGATCCAACTTTAAATTCTTTCAGAGAAGATCAGCTGGTGCAAGTTGCTGATTTAATAAAATTATGTTGCCTGCCTAACCCTCTGAGTAGACCAACTATGAAAGAAATTTGCGAGACATTGAAGAAGATTACTGGAATAAAACCTGAGGGTGCAGCTCCCAAACACTCTCCTCTTTGGTGGGCAGAGCTTGAGATTTTGTCTGCAGATGGGAACTGA 1839 0.4345 MESDPFGALSNWIDGELAVNPCSWSGVECSEGKVVALNLKDLCLRGTLPPELANLAHVKSIILRNNSFFGTIPEGMGMLTELEFLDLGYNNLSGPLPIDFGNNLSLAILLLDNNDLLGGVPPEIYELAALSECQVDESILSVAPKVQSCNRRPSPWNIDQDMKGVGQRRLQQFEMRQSPWNRETQPPPTETPDNKPSPSNDPIVSDGPAFPPIESSPSPFPVVNSTASRDPRSAPSPTTTSPSVPNRAQPVKTTSLKHWAALVGGIGGAVLFVVFTGVYLCKSDKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGTVYKGTLSSGVEIAAASMTVTSNKWSKNLEAQFRKKVEMLSKVNHKNFINLLGYCEEEEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWLTRMRIATGMAYCLQHLHQLNPPSAHSNLNSSSVYLTEDYAAKLSELSFWNEITSAERKATGSKRLIAPSGGLKSNVYSFGVILFEMVTGQLPYSADDSSLDDWASNYLRRDHPLRKMVDPTLNSFREDQLVQVADLIKLCCLPNPLSRPTMKEICETLKKITGIKPEGAAPKHSPLWWAELEILSADGN* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00914 612 PANTHER PROTEIN MALE DISCOVERER 2 1 609 - -
Pte16g00914 612 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
Pte16g00914 612 MobiDBLite consensus disorder prediction 176 250 - -
Pte16g00914 612 SUPERFAMILY L domain-like 3 132 - -
Pte16g00914 612 FunFam Nuclear pore complex protein NUP107 1 144 - -
Pte16g00914 612 ProSiteProfiles Protein kinase domain profile. 321 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00914 612 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Pte16g00914 612 SUPERFAMILY Protein kinase-like (PK-like) 304 581 IPR011009 -
Pte16g00914 612 FunFam Inactive receptor-like serine/threonine-protein kinase 295 402 - -
Pte16g00914 612 Pfam Protein tyrosine and serine/threonine kinase 324 581 IPR001245 GO:0004672|GO:0006468
Pte16g00914 612 MobiDBLite consensus disorder prediction 219 250 - -
Pte16g00914 612 Gene3D Transferase(Phosphotransferase) domain 1 403 591 - -
Pte16g00914 612 Gene3D Ribonuclease Inhibitor 1 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00914 Pte-Chr16 28328901 28332748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00914 23 584 Receptor kinase-like Gene Family AT5G05160 27.467 1.39e-41 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte16g00914 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00914 - - qlo:115955904 727.628