Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00909 ATGGGAACCTCTCTGCATGTCAAAGAGGCTGTAATGGTGACTCCGTCTGAGCCAACTCCATCTCATGTCCTTACTCTTTCAGCCATCGACTCCCAGATCTTCCTTCGATTCACCATAGAATACCTCTTCATCTACAAGTCTTCAACCTCCCAATCTGGATTTGACCATAACGCAACAGTTGCTCGCTTGAAAGCTGCGTTGGCTGATGCACTGGTTCCTTATTACCCATTTGCTGGAAGAGTCGTCAGGTCCAACGCTACTACTGCTACTTGTAATACCAATCTTGAAGTAGTCTGCAATGGCCAAGGAGCTCTTTTCGTTCACGCCATTTCGAATTCTCACACAGCTTCAGATTTTCAAAGGGCTCCAAAGACTGTGACGCAATGGAGAAAATTCTTGTCCTTCTACGTACAAGACGTGCTTCAAGGGTCTCCATTGCTAGTGCTTCAACTCACTTGGCTCAAAGACGGGGCTGCAGCACTGGGCGTTGGTATTAATCACTGTATATGTGACGGAGTTGGCAGCTCTGAGTTTCTCAACACTTTGGTTAAGTTGGCAACCGGAGAATGTGGACTCAGCAGTATCGAACCCAAAGCAGTATGGGATCGTCATCTGCTCGACCGACAACCTTATAGTTCCTTAATTTCCGGACGAACTCATTCGGTAATGTCTACTCTTCCCGTATTCAACCGAGTACAAGACATCTCTGCTTTCGCGAGTCGGTTTTCAGACGAACTTATCCCTACTTCCATTACCTTCAGTAGAAAGCGTCTAGAAGAGTTGAAAAAGCTTGCACACTCGACAAGTGTTCGTCGGAGCGTGGCTGCAGAGACGACATCGCCGTCATACACTTGTTTTGAGGTTCTTGCTGCTCATATATGGAGGAACTGGGCAAGGGCGTTGAGCTTACCTTCAAACCAAGTATTGAAGCTACTTTTCAGCATCAATGTACGGAACCGACTCAAACCGAGTCTGCCCGCCGGGTACTATGGCAACGCGTTCGTTCTGGGGTGCGCTCAGACCAAAGTGAAGGACTTGGTGGAGAAAGGTCTAGGGTATGCGTCTGGTTTGGTGAAGAGGGCGAAGGAGAGGGTAGACGAGGAGTATGTGAGTAAGGTGATTGAGTCAGTTTCCGAGTCAAGAGCCAGTCCAGACTCGGTTGGAGTGCTGATATTGTCGCAATGGTCAAAACTGGGACTGGAAAAGATTGACTTTGGAATGGGGTTGCCAGTACATGTGGGTCCCATCTGCGTCGATAGGTACTGTTTGTTTGTACCAGTCGATGAGAAAGAGAGAGAAGGAGTGAAGGTGATGGTGGCTCTTCCTACTGATGCTGTTGACAATTACGAGTCATTGGTCAGAGCACCAAACTCTTAA 1377 0.4793 MGTSLHVKEAVMVTPSEPTPSHVLTLSAIDSQIFLRFTIEYLFIYKSSTSQSGFDHNATVARLKAALADALVPYYPFAGRVVRSNATTATCNTNLEVVCNGQGALFVHAISNSHTASDFQRAPKTVTQWRKFLSFYVQDVLQGSPLLVLQLTWLKDGAAALGVGINHCICDGVGSSEFLNTLVKLATGECGLSSIEPKAVWDRHLLDRQPYSSLISGRTHSVMSTLPVFNRVQDISAFASRFSDELIPTSITFSRKRLEELKKLAHSTSVRRSVAAETTSPSYTCFEVLAAHIWRNWARALSLPSNQVLKLLFSINVRNRLKPSLPAGYYGNAFVLGCAQTKVKDLVEKGLGYASGLVKRAKERVDEEYVSKVIESVSESRASPDSVGVLILSQWSKLGLEKIDFGMGLPVHVGPICVDRYCLFVPVDEKEREGVKVMVALPTDAVDNYESLVRAPNS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00909 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 444 - -
Pte16g00909 458 Pfam Transferase family 5 450 - -
Pte16g00909 458 Gene3D - 4 218 IPR023213 -
Pte16g00909 458 Gene3D - 238 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00909 Pte-Chr16 28286968 28288447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00909 5 453 Monolignol Biosynthesis Gene Families AT5G48930 27.742 1.57e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00909 - - qsu:112015554 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00909 16 28286968 28288447 Pte16g00909 16 28286968 28288447 RCT