Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00899 ATGGGAACCTCTCTGCATGTCAAAGAGGCTGTAATGGTGACTCCGTCTGAGCCAACTCCATCTCATGTCCTTACTCTTTCAGCCATCGACTCCCAGATCTTCCTTCGATTCACCATAGAATACCTCTTCATCTACAAGTCTTCAACCTCCCAATCTGGATTTGACCATAACGCAACAGTTGCTCGCTTGAAAGCTGCGTTGGCTGATGCACTGGTTCCTTATTACCCATTTGCTGGAAGAGTCGTCAGGTCCAACGCTACTACTGCTACTTGTAATACCAATCTTGAAGTAGTCTGCAATGGCCAAGGAGCTCTTTTCGTTCACGCCATTTCGAATTCTCACACAGCTTCAGATTTTCAAAGGGCTCCAAAGACTGTGACGCAATGGAGAAAATTCTTGTCCTTCTACGTACAAGACGTGCTTCAAGGGTCTCCATTGCTAGTGCTTCAACTCACTTGGCTCAAAGACGGGGCTGCAACACTGGACCTTGGTATTAATCACTGTATATGTGATGGAGTTGGTAGCTCTGAGTTTCTCAACACTTTGGTTAAGTTGGCAACCGGAGAATGTGGACTCAGCAGTATCGAACCCAAAGCAGTATGGGATCGCCATCTGCTCGACCGACAACCTTATAGTTCCTTAATTTCCGGACGAACTCATTCGGTAATGTCTACTCTTCCCGTATTCAACCGAGTACAAGACATCTCTGCTTTCGCGAGTCGGTTTTCAGACGAACTTATCCCTACTTCCATTACCTTCAGTAGAAAGCGTCTAGAAGAGTTGAAAAAGCTTGCACACTCGACAAGTGTTCGTCGGAGCGTGGCTGCAGAGACGACATCGCCGTCATACACTTGTTTTGAGGTTCTTGCTGCTCATATATGGAGGAACTGGGCAAGGGCGTTGAGCTTACCTTCAAACCAAGTATTGAAGCTACTTTTCAGCATCAATGTACGGAACCGACTCAAACCGAGTCTGCCCGCCGGGTACTATGGCAACGCGTTCGTTCTGGGGTGCGCTCAGACCAAAGTGAAGGACTTGGTGGAGAAAGGTCTAGGGTATGCGTCTGGTTTGGTGAAGAGGGCGAAGGAGAGGGTAGACGAGGAGTATGTGAGTAAGGTGATTGAGTCAGTTTCCGAGTCAAGAGCCAGTCCAGACTCGGTTGGAGTGCTGATATTGTCGCAATGGTCAAAACTGGGACTGGAAAAGATTGACTTTGGAATGGGGTTGCCAGTACATGTGGGTCCCATCTGCGTCGATAGGTACTGTTTGTTTGTACCAGTCGATGAGAAAGAGAGAGAAGGAGTGAAGGTGATGGTGGCTCTTCCTACTGATGCTGTTGACAATTACGAGTCATTGGTCAGAGCACCAAACTCTTAA 1377 0.4771 MGTSLHVKEAVMVTPSEPTPSHVLTLSAIDSQIFLRFTIEYLFIYKSSTSQSGFDHNATVARLKAALADALVPYYPFAGRVVRSNATTATCNTNLEVVCNGQGALFVHAISNSHTASDFQRAPKTVTQWRKFLSFYVQDVLQGSPLLVLQLTWLKDGAATLDLGINHCICDGVGSSEFLNTLVKLATGECGLSSIEPKAVWDRHLLDRQPYSSLISGRTHSVMSTLPVFNRVQDISAFASRFSDELIPTSITFSRKRLEELKKLAHSTSVRRSVAAETTSPSYTCFEVLAAHIWRNWARALSLPSNQVLKLLFSINVRNRLKPSLPAGYYGNAFVLGCAQTKVKDLVEKGLGYASGLVKRAKERVDEEYVSKVIESVSESRASPDSVGVLILSQWSKLGLEKIDFGMGLPVHVGPICVDRYCLFVPVDEKEREGVKVMVALPTDAVDNYESLVRAPNS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00899 458 Pfam Transferase family 5 450 - -
Pte16g00899 458 Gene3D - 238 453 IPR023213 -
Pte16g00899 458 Gene3D - 2 218 IPR023213 -
Pte16g00899 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00899 Pte-Chr16 28162860 28164339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00899 5 453 Monolignol Biosynthesis Gene Families AT5G48930 27.312 4.77e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00899 - - qsu:112015554 565.074