Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00892 ATGGCTACTGCAATGTACCCACCTGCGCCTCCTTTCTATAGACTCTACAAAGATTACTTACAAAACCCTAAATCCGCTCCTGAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGATCCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGTGCCAGCTGTACCCAAAAGGATCTAATGTGGATTTCAAGAAAGAACTAAGGTCGCTTAACAGAGAATTGCAATTGCACGTCCTAGAGCTTGCTGATATTCTTGTTAAGAGGCTATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAAATTCACTACGACCTCACCAGTTATCTGAGGAACCAGCAAGTCTCTCCACTTTAATGTGGTATGATCTTCATCATAGACGTGCAGTGCTTGCTTCACAGTTCACAATTTGCAAATTATTGATAAACATAGAGGAGAAATGTGGTTTCTTGTTATCTTGA 510 0.4137 MATAMYPPAPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGSTYTTDDVLPSLEEQGVCQLYPKGSNVDFKKELRSLNRELQLHVLELADILVKRLSQYARRVEDISVIFKNLHHLLNSLRPHQLSEEPASLSTLMWYDLHHRRAVLASQFTICKLLINIEEKCGFLLS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00892 169 Gene3D - 62 158 IPR044888 -
Pte16g00892 169 Pfam MED7 protein 25 144 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte16g00892 169 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 127 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte16g00892 169 SUPERFAMILY Mediator hinge subcomplex-like 67 127 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00892 Pte-Chr16 28061383 28063143 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte16g00892 Med7 5.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00892 K15148 - tcc:18599197 223.402