Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00891 ATGGCTACTGCAACGTACCCACCTCCGCCTCCTTTCTATAGACTCTACAAAGATTACTTACAAAACCCTAAATCCGCTCCTGAACCTCCTCCTCCAATTGAAGGCACCTACGTTTGTTTTGGATCCACCTACACTACTGATGATGTGCTACCAAGCCTAGAAGAGCAGGGAGTGCGCCAGCTGTACCCAAAAGGATCTAATGTGGATTTCAAGAAGGAACTAAGGTCGCTTAACAGAGAATTGCAATTGCACGTCCTAGAGCTTGCTGATATTCTTGTTGAGAGGCCATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAAATTCACTACGACCTCACCAGGCAAGAGCAACACTAATTCATATTCTAGAACTCCAAATACAACGACGGAAACAAGCTATTGAGGATATCAAGAGGAGGAGAGAAGAGGCGCAGATACTACTTCAGGAGTCCCTGGCAACCCTGGATTGA 501 0.4451 MATATYPPPPPFYRLYKDYLQNPKSAPEPPPPIEGTYVCFGSTYTTDDVLPSLEEQGVRQLYPKGSNVDFKKELRSLNRELQLHVLELADILVERPSQYARRVEDISVIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAIEDIKRRREEAQILLQESLATLD* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00891 166 Coils Coil 130 164 - -
Pte16g00891 166 Gene3D - 61 158 IPR044888 -
Pte16g00891 166 SUPERFAMILY Mediator hinge subcomplex-like 67 155 IPR037212 GO:0016592
Pte16g00891 166 Pfam MED7 protein 4 155 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte16g00891 166 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 164 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00891 Pte-Chr16 28051323 28053303 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte16g00891 Med7 5.1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00891 K15148 - pvy:116132674 296.975