Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00885 ATGGCTGTCTCCGACGTCAAAGCTGTACTTGAATTCTTAAGGAAGAATGGCTTCTCGGAGGCTGAGGCTGCACTCAAGGAGGACATTCTTGACAAAGCTGAACTGGGGTCCTTTGACTATGGCAAGTTCTTCTTCCCAATGATACCAACGCTATCGCCGGTGAGAATTCCGTCCATTACTTCGCTATCGGATGCTCCTCCTGACAATCTGGTTAGCTCCAAATCTACTTATAGGCCGTCTGTGGATGAAGAGTTTGTCAGCTTGGGTTCCTCTACTTCTCTCCTTTGTTCTTCAGAATTTACCAATCCATATGGAATTTGTTCCACATCTCGTGGTGGTTCTGAAGCATCATCTGATGGATTATCTCAGTTTGCCACTGCTCCTGATTACAATGATTTCAATATGCAAACTGACTTGTGGTTTGACGAAGGTGATGAAGGCAATTCTATGACTCCTAATTTTGATGGGCAAGATTTCTTTAGCAATCAAAGTGAAGGTAAGTTTATCATGACATTAGAAACAGAGCAGCAACAGCAGAACACTCTTGATCTTAATGTCAAATATGAACTGTATCAATCAGTAGAAAATGACAATTACTTAGACAAAGCTTGTCATTTCAATATACCATCAACGGAGAATGAAAATGCGGATCATGCAAAAGATTATCTTCATGTTGATAAGATGAATCAGTCTGAAGAGGGATTTAATGGTAAAACTGATGACTCCACGGACACCGGAGGATCTTATGAAGGACAAATGGAAAAAGATGCTTACCCCTCCCAGAATGAGATTCATCTGAATGATTATGATTTGAAGTTTGTAAAAAACATACTGCCTTCTTCCAAATATGCTCCAGAAAATAAAAGGAGCCAGATTTTTGACAACTTTTCTTCTGATGAGTGGACCAAACAGTACAATGATTCAGCTGAATTTAATAAGAAAGCTACGGAGACATATTCAGTGCCAATTTTTTATGAAGGTTATGAAGCTAGAAATGAGGGAGAACTGAATGAAGAAAGCCAAAAAAGTGAGACATCTGAAGAGCTCCTGATATATGACACTCAGAACAGTGGATACGAAGAGTTCGATCTGAGAATCATACACAGAAAAACCAGGACCGGATTTGAAGAGAACAAGGAATTTCCCATAGTATTGAACACAGTTATTGCTGGTAGATACTATGTAACAGAATACTTAGGTTCAGCTGCATTCAGCAAGGTTGTGCAGGCACGTGATCTTCTAGGAGGCATGGATGTTTGCTTGAAGATTATAAAAAATAACAAAGACTTATTTGATCAGAGTTTGGATGAAATCAAACTTCTAAAGCTTGTCAATAAGAACGACCCTAGTGATAAGCACCACATTCTACGTCTTGACGACTACTTTTATCATCAGGAGCATCTTTTCATTGTTTGTGAACTCCTTCGAGCAAACTTGTATGAATTTCAGAAATTCAACCAAGAATCTGGTGGCGACGCATATTTCACAATGAGAAGGTTACAGATCGTAGCTCGTCAATGTTTGGAAGCACTGGATTACTTGCATGGCCTGGGAATTATTCACTGTGACCTAAAACCTGAGAATATTCTTATAAAGAATTATAGAAGATGTGAAGTAAAAGTGATTGATCTAGGAAGCAGTTGCTTTCAGTCAGACAACTTGTGCCTGTATGTACAATCTCGTTCCTACAGGGCTCCGGAAGTGATTGTAGGTCTCCCATATGACCAAAAAATTGACATATGGTCACTGGGTTGTATATTGGCTGAGCTATTCTCTGGTGAAGTGCTTTTTCAAAATGATGCAGTAGTGATGATCCTTGCCCGCATGATTGGGATGCTCGGTCCTATTGACCGGGAGATGTTGGAAAATGGGCAGGAAACACACAAGTACTTCACACAAGAATATGATCTTTACCGCGTAGATGAGAAAACAAATGCACTGGAATACATAATTCCAGAGGAGTGTTCATTGGCAGAGCATGTACAAGTTCATGACATTGGATTCATCGACTTCGTGAGGTACTTGCTGAGGATTAACCCTAAAAGACGGCCTACTGCAAAGCAGGCACTGGAACATCCTTGGCTGTCTCGTGTCCATGATTCCATTTCCAAATAG 2115 0.4024 MAVSDVKAVLEFLRKNGFSEAEAALKEDILDKAELGSFDYGKFFFPMIPTLSPVRIPSITSLSDAPPDNLVSSKSTYRPSVDEEFVSLGSSTSLLCSSEFTNPYGICSTSRGGSEASSDGLSQFATAPDYNDFNMQTDLWFDEGDEGNSMTPNFDGQDFFSNQSEGKFIMTLETEQQQQNTLDLNVKYELYQSVENDNYLDKACHFNIPSTENENADHAKDYLHVDKMNQSEEGFNGKTDDSTDTGGSYEGQMEKDAYPSQNEIHLNDYDLKFVKNILPSSKYAPENKRSQIFDNFSSDEWTKQYNDSAEFNKKATETYSVPIFYEGYEARNEGELNEESQKSETSEELLIYDTQNSGYEEFDLRIIHRKTRTGFEENKEFPIVLNTVIAGRYYVTEYLGSAAFSKVVQARDLLGGMDVCLKIIKNNKDLFDQSLDEIKLLKLVNKNDPSDKHHILRLDDYFYHQEHLFIVCELLRANLYEFQKFNQESGGDAYFTMRRLQIVARQCLEALDYLHGLGIIHCDLKPENILIKNYRRCEVKVIDLGSSCFQSDNLCLYVQSRSYRAPEVIVGLPYDQKIDIWSLGCILAELFSGEVLFQNDAVVMILARMIGMLGPIDREMLENGQETHKYFTQEYDLYRVDEKTNALEYIIPEECSLAEHVQVHDIGFIDFVRYLLRINPKRRPTAKQALEHPWLSRVHDSISK* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00885 704 CDD PKc_DYRK_like 393 695 - -
Pte16g00885 704 Gene3D Transferase(Phosphotransferase) domain 1 447 695 - -
Pte16g00885 704 Gene3D Phosphorylase Kinase; domain 1 388 474 - -
Pte16g00885 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Pte16g00885 704 SUPERFAMILY Protein kinase-like (PK-like) 381 700 IPR011009 -
Pte16g00885 704 ProSiteProfiles Protein kinase domain profile. 393 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00885 704 FunFam Putative serine/threonine-protein kinase dyrk2 387 474 - -
Pte16g00885 704 SMART serkin_6 393 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00885 704 Pfam Protein kinase domain 395 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00885 704 FunFam Serine/threonine-protein kinase ppk15 472 696 - -
Pte16g00885 704 PANTHER DUAL SPECIFICITY PROTEIN KINASE 245 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00885 Pte-Chr16 27996078 28000233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00885 390 690 MAP Kinase Gene Family AT5G19010 30.218 9.57e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pte16g00885 Pkinase 7.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00885 - - qsa:O6P43_020194 854.744