Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00866 ATGGAGGGGAAGGAGCAAGATGTGAGTTTGGGAGCCAACAAGTTCTCGGAGAGACAGCCAATTGGAATAGCAGCTCAAAGCCAAGATGATGGGAAGGACTACAAGGAGCCACCCCCAGCTCCATTGTTTGAGCCTGGTGAGCTGACCTCTTGGTCATTCTACAGAGCTGGCATAGCTGAGTTCATGGCTACTTTCTTGTTTCTTTATATCACTGTGCTCACTGTCATGGGCTTCTCAAAAGAACAAAACAAATGCAAAACTGTTGGGATTCAAGGAATTGCTTGGGCTTTTGGGGGTATGATCTTCGCTCTTGTTTACTGCACAGCCGGTATCTCAGGTGGTCATATCAACCCAGCAGTGACGTTCGGTCTGTTCCTGGCAAGGAAGCTGTCGTTGACGAGGGCGGTGTTCTACATGGTGATGCAGGTGTTGGGTGCCATTTGTGGTGCTGGTGTAGTGAAGGGTTTTGAGGGGAAGGCACAGTATCAGCTCAACAAAGGTGGTGCCAATTTTGTCAATCCTGGCTACACGAAAGGTGATGGTCTTGGTGCTGAGATCATTGGCACCTTCGTGCTTGTTTACACTGTGTTCTCAGCCACGGATGCCAAGCGTAACGCCAGAGATTCCCATGTCCCTGTAAGCAATTTTACATATGCAAATATCATTGACGTTGTATAA 678 0.4823 MEGKEQDVSLGANKFSERQPIGIAAQSQDDGKDYKEPPPAPLFEPGELTSWSFYRAGIAEFMATFLFLYITVLTVMGFSKEQNKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQVLGAICGAGVVKGFEGKAQYQLNKGGANFVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPVSNFTYANIIDVV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00866 225 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Pte16g00866 225 Gene3D Glycerol uptake facilitator protein. 40 220 IPR023271 -
Pte16g00866 225 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00866 225 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00866 225 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00866 225 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00866 225 MobiDBLite consensus disorder prediction 1 39 - -
Pte16g00866 225 SUPERFAMILY Aquaporin-like 47 213 IPR023271 -
Pte16g00866 225 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 214 IPR034294 -
Pte16g00866 225 Pfam Major intrinsic protein 47 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00866 Pte-Chr16 27777885 27780474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00866 1 213 Major Intrinsic Protein MIP AT4G00430 84.038 3.33e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00866 K09872 - cpap:110819219 386.726