Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00862 ATGCCTTTCCTCAACGTTGTCTCCAAATGCACTGTCTTCCCCGACCAAAAATCCGCTCTTGCAGATCTCAAACTCTCCGTCTCTGACCTGCCCATGCTTTCTTGTCACTACATCCAAAAGGGTTGCCTCTACACTCGCCCTTCTCTTCCATTTGACTCTCTCACTCTTCTCCTTAAAGCTTCGCTCTCTCGCACGCTTTCTCTTTTCCCACCTCTCGCTGGCCGTTTGAAAACCGATTCCGATGGCTATGTCTACATTACATGCAACGATGCTGGCGTTGACTTCGTTCAAGCTAATGCTAATGGTCTTTACGTCCGTGACATTCTTGCTCCCACCTACGTTCCCGATTGTGTGAAGCAATTATTTGAGTTTGATCGGACTGTGAGTTACACCGGCCATGTTCAGCCCATCATGGCTGTTCGGGTCACTGAGCTAGCTGATGGAGTCTTCATTGGATGTGCAGTGAATCATGCTGTTGTCGACGGTACGTCTTTCTGGAACTTCTTCAACACCTTTGCTGAAGTCTGCAAAGGAGTCATCAAGCTGAAGTCAAAGATACCGGACTTTCGTCGTGAATCGATTCTAATTTCCAAGGCGGTGCTTCAGTTGCCGGTAGATGGTCCCCAGGTGACCTTCAATGCGGACGATCCCATTCGAGAGAGAATCTTCAGCTTCAGTCGTGAAGCCCTTCTCAAACTGAAAGCAAAAGCCAACAACTTGAAATGGACTCAAAACGACGATGTCGTTGATGCCCTTGAACTCCTTGGGAAACAAAGCAACGACAGCTACAACCGGAGAGTGTCGTCAGTACTCTTCAACAATTGGCTGAAGAGTAAGGCCGCAAAACGAAAAAGCGACGAAACAGTTGGGGAAATTTCTTCGTTTCAATCTCTCTGCGCGTTATTATGGCGTGGGGTGACACGTGCAAGGAAGTTGGGACCGTCGAAAACGACGACATTTAGAATGGCAGTGAACTGCCGTCACAGGCTTGAGCCGAAGCTTGATCTATTCTACTTCGGGAACGCAATTCAAAGCATACCGACTTACGCTTCCGCCGGTGACGTGATTTCCAATGATCTGCGATGGTGTGCGGAGCAGCTGAACAAGAACGTGAAGGCCCACAGTAGCGAAACCGTGAGACGATTCATAGAGGATTGGGAGAGCAATCCAAGGTGTTTCCCGCTAGGAAACTTTGACGGTGCATCCATCACGATGGGTAGCTCGCCGAGATTCCCAATGTACGAGAATGACTTCGGCTGGGGTAGACCTTTGGCTGTGAGAAGCGGTGGGGCGAACAAGTTCGACGGGAAGATCTCGGCTTTTCCCGGTAGAGCAGGTGGAGGGAGCGTAGATTTGGAGGTGGTCTTGTCGCCGGAAATAATGGCGGGGTTGGAGTTGGATTCGGAGTTCATGCAGTACGTATCAATTTAG 1431 0.4969 MPFLNVVSKCTVFPDQKSALADLKLSVSDLPMLSCHYIQKGCLYTRPSLPFDSLTLLLKASLSRTLSLFPPLAGRLKTDSDGYVYITCNDAGVDFVQANANGLYVRDILAPTYVPDCVKQLFEFDRTVSYTGHVQPIMAVRVTELADGVFIGCAVNHAVVDGTSFWNFFNTFAEVCKGVIKLKSKIPDFRRESILISKAVLQLPVDGPQVTFNADDPIRERIFSFSREALLKLKAKANNLKWTQNDDVVDALELLGKQSNDSYNRRVSSVLFNNWLKSKAAKRKSDETVGEISSFQSLCALLWRGVTRARKLGPSKTTTFRMAVNCRHRLEPKLDLFYFGNAIQSIPTYASAGDVISNDLRWCAEQLNKNVKAHSSETVRRFIEDWESNPRCFPLGNFDGASITMGSSPRFPMYENDFGWGRPLAVRSGGANKFDGKISAFPGRAGGGSVDLEVVLSPEIMAGLELDSEFMQYVSI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00862 476 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 472 - -
Pte16g00862 476 Gene3D - 4 203 IPR023213 -
Pte16g00862 476 Gene3D - 205 466 IPR023213 -
Pte16g00862 476 Pfam Transferase family 6 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00862 Pte-Chr16 27760256 27762025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00862 4 465 Monolignol Biosynthesis Gene Families AT5G48930 27.273 7.03e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00862 - - hbr:110653563 708.368