Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00836 ATGCAACTATTGTTCACTTGTGAACTGCAGACTTATATTGTTTATATGGGAAATCACCCTGGGGATGAGCTCTCCTTGTCAAAGATCCACAAGAGCATGCTGCACGAAGTTCTTGGCAGTAAAATAATTGGAGCAAAGTACTATCGTATTAACGGATCGTATGGAGAAGATGATACATCACCCTTAGACACACATGGCCATGGATCGCACACTGCATCCATAGCTGCAGGAGATGTTACCTTGGCAAGTTTATATGGTCTAGGGTCAGGAATAGCAAGAGGAGGCGTGCCCTCAGCTCGTATTGCTGTATACAAAGTTTGCTGGCATGATGGTTGTCAGGATGCAGACATTCTTGCAGCGTTTGATGATGCCATTGCTGACGGGGTAGACCTGATTTCCATCTCAATGGGTTTCATCGGTGGTCGAAGTAATTATTTCAATGATTCCATAGCTATTGGAGCTTTCCATGCCATGAGAAAAGGAATTCTTACATCTACTTCTGCCGGTAACGACGGCCCGAGATTAAAAACTATCAATAATTTTTCACCATGGAGTATTTCAGTCGCTGCCAGCACCATTGACAGAAAGTTCTTGACTAAGGTTCAGCTAGGAAACCGGCAAACATATGAGGTATACTATACATTTATCATTTCCTTCAAAAGGTGTTTCCATGTAAACAATTGTGGGAATTACATGGATGATTCCATGCATGTGAACATGTACAGGTCTTGCATAAACAACTCATTGGATCGAAATTTAGTCAAGGGAAAGATACTTCTTTGTGATGGTTTCTCTGGTGCAACGCAAGTGGCATTTGCTTCAGGGGCAAAGGGTATCGTCATGCATAGCTCTGAAATCAGAGATGTCGCTTATTCTTATGCATTACCTGCATCGTACATTAGCACTGACGATGCTAACATGATCCGAACCTACATGAACACGTCAAGGAATCCAAAAGTGAGCATAACGAAGAGCAACACAGATATAGCTACCTCTGCCCCTTTAATAGTATCATTTTCTTCAAGGGGTCCTAACCCTGTAACCAATGACATTCTCAAGCCTGATATTGCTGCCCCTGGGGTTGACATTCTAGCTGCATGGTCTCCAAAAGCAGCGATAACTGGTGTTAAGGGCGACAAAAGGAAAGTGAATTACAATTTACTGTCGGGTACATCCATGGCCTGCCCTCATGTAACAGGAACAGCTGCTTACATCAAATCATTCCATCCCAGCTGGTCTCCTGCAGCAATCAAGTCAGCAATAATGACAACAGCTACCCCGATGAGTCCTGCACTTAATACTGGAGCAGAATTTGCATATGGTTCAGGCCATCTAAACCCCATGAAGGCATTAAACCCTGGTTTGGTATATGATGCTAGCGAGATAGACTATGTTAAGTTTTTGTGTGGACAAGGTTATAACACAAAGACACTACAACTTGTGACCGGGGGTAACAGTAGCTGTATAGAAGCCAATAATGGAACTGTATGGGATTTGAACTATCCTTCCTTTGCAGTCTCAACTAGTCCCTCTACATTAATAAATCGTGTATTCAACAGGACAGTTACTAACGTTGGTACGCCAAATTCTACGTATAGAGCTATTTTGACCATTGTAGGAGGACTTGACATCAAAGTAAGCCCAAGTCGTTTATCATTCAACTCTGTGGAACAGAAGATGTCTTTTCAGCTTAGGGTTCGAGGAAGCATTCACTCCACCATTGTCTCTTCTGCTTTGGTATGGGATGATGGTACTCACAAGGTGAGAAGCCCAATTGTTGTGTTTTCTATATGA 1794 0.427 MQLLFTCELQTYIVYMGNHPGDELSLSKIHKSMLHEVLGSKIIGAKYYRINGSYGEDDTSPLDTHGHGSHTASIAAGDVTLASLYGLGSGIARGGVPSARIAVYKVCWHDGCQDADILAAFDDAIADGVDLISISMGFIGGRSNYFNDSIAIGAFHAMRKGILTSTSAGNDGPRLKTINNFSPWSISVAASTIDRKFLTKVQLGNRQTYEVYYTFIISFKRCFHVNNCGNYMDDSMHVNMYRSCINNSLDRNLVKGKILLCDGFSGATQVAFASGAKGIVMHSSEIRDVAYSYALPASYISTDDANMIRTYMNTSRNPKVSITKSNTDIATSAPLIVSFSSRGPNPVTNDILKPDIAAPGVDILAAWSPKAAITGVKGDKRKVNYNLLSGTSMACPHVTGTAAYIKSFHPSWSPAAIKSAIMTTATPMSPALNTGAEFAYGSGHLNPMKALNPGLVYDASEIDYVKFLCGQGYNTKTLQLVTGGNSSCIEANNGTVWDLNYPSFAVSTSPSTLINRVFNRTVTNVGTPNSTYRAILTIVGGLDIKVSPSRLSFNSVEQKMSFQLRVRGSIHSTIVSSALVWDDGTHKVRSPIVVFSI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00836 597 CDD PA_subtilisin_like 201 322 - -
Pte16g00836 597 Pfam Fibronectin type-III domain 498 594 IPR041469 -
Pte16g00836 597 Pfam Subtilase family 49 443 IPR000209 GO:0006508|GO:0008236
Pte16g00836 597 Gene3D Peptidase S8/S53 domain 40 464 IPR036852 GO:0004252|GO:0006508
Pte16g00836 597 PRINTS Subtilisin serine protease family (S8) signature 389 405 IPR015500 -
Pte16g00836 597 PRINTS Subtilisin serine protease family (S8) signature 63 76 IPR015500 -
Pte16g00836 597 SUPERFAMILY Subtilisin-like 49 452 IPR036852 GO:0004252|GO:0006508
Pte16g00836 597 Gene3D - 468 596 - -
Pte16g00836 597 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 594 IPR045051 -
Pte16g00836 597 ProSitePatterns Serine proteases, subtilase family, serine active site. 390 400 IPR023828 -
Pte16g00836 597 Gene3D - 194 329 - -
Pte16g00836 597 ProSiteProfiles Serine proteases, subtilase domain profile. 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00836 Pte-Chr16 27325747 27329129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00836 41 597 Subtilisin-like Serine Gene Family AT5G59100 46.167 4.94e-161 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00836 - - qsa:O6P43_014382 698.738