Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00828 ATGGCTTCACAGGGACACGTAGTAATGGACCCTGCCTTGCTGGATGATATCATCAGACGGCTAACGGAAGTCCGCTCAGCAAGACCCGGAAAGCAGGTTCAGCTCTCTGAGTCCGAGATCAAGCAGCTTTGTGTTGTTGCCAGAGAGATATTCATCCAACAGCCTAATTTGCTTGAACTCGAAGCACCTATCAAGATTTGCGGTGACATTCATGGGCAGTACAGTGACTTGTTAAGGCTCTTTGAATATGGAGGATTCCCACCTAATGCTAATTACCTGTTTTTGGGAGACTATGTGGATCGTGGCAAGCAGAGTTTAGAGACAATCTGTCTTCTGCTTGCCTATAAGATTAAATATCCTGAAAACTTTTTCCTTCTAAGAGGGAATCATGAATGTGCATCCATTAACAGGATATATGGTTTCTATGATGAATGTAAGCGGCGGTTTAACGTAAGGCTCTGGAAGACCTTCACAGACTGCTTCAACTGTCTTCCAGTTGCAGCTCTTATAGATGACAAAATATTGTGCATGCATGGCGGTCTTTCTCCAGATCTCGCAAATCTAGATCAAATTAGAAACCTAGCTCGTCCTACTGCTGTTCCGGACACCGGTTTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGAGAAGTTAAAGGATGGGGTATGAACGATAGAGGGGTCTCATATACCTTTGGCCCTGATAAGGTGGTTGAATTTTTGACAAATCATGATTTGGACCTCATCTGTCGTGCTCATCAGGTTGTGGAGGATGGGTATGAATTCTTCGCAGACAGGCAACTTGTCACTATATTTTCAGCTCCTAACTATTGCGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGAAAACTTGATGTGCTCCTTCCAGATTCTCAAGCCTGCAGAGAAAAAAACCAAGTTTCTGATGTCAAACAAAATTTGA 951 0.4353 MASQGHVVMDPALLDDIIRRLTEVRSARPGKQVQLSESEIKQLCVVAREIFIQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDDKILCMHGGLSPDLANLDQIRNLARPTAVPDTGLLCDLLWSDPGREVKGWGMNDRGVSYTFGPDKVVEFLTNHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKFLMSNKI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00828 316 Gene3D - 5 314 IPR029052 -
Pte16g00828 316 CDD MPP_PP1_PPKL 14 303 - -
Pte16g00828 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Pte16g00828 316 SUPERFAMILY Metallo-dependent phosphatases 27 309 IPR029052 -
Pte16g00828 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Pte16g00828 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Pte16g00828 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Pte16g00828 316 FunFam Serine/threonine-protein phosphatase 61 314 - -
Pte16g00828 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 307 - -
Pte16g00828 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00828 Pte-Chr16 27224714 27228707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00828 42 251 Calmodulin-binding Proteins AT5G63870 30.000 5.42e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00828 K06269 - cave:132187402 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00828 16 27224714 27228707 Pte16g00828 16 27224714 27228707 RCT