Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00821 ATGGTCGCAACGCAATATCACCTCCTCTTCACGGTGGGGTTTCTATTATGCGCCGGTTGTGTCATGTCCGCTACCCACTGCCCTGACTGCGGGAATACCCCAGTACCGTACCCACTCAGCACCGGACCCAACTGCGGTGTCCAATCTTACAAGCTCCGATGTCTCTCCGGCTCTCTCTTCTTCGACACACTCAACAATTCCTACCCCATTTCCTCCATCAACCCACAAGCCCAACGACTTGTGATCCGACCCGCAACCCTCTTGCCAAGAACATGCGTCACCTCTGATTTCGTTCACCAAGGCGTACAGCTCAATAGCTCGCTTCCCTTCAACGTCACCAGCAGTAACACCATCTTGTACTTCAACTGTTCCGACCTCCTACTGAGCTCTCCTCTGAACTGTTCAAACTATAGCTTGTGCCACACGTACCTCAACAACACCAGAGACGCAAGCCCCTGCGAGGAGGCTCCTCTGTGCTGTACGTTCAGAGCGGGTGGGTCTTCCACTTCGTATATGATCCGAGTCAGGGATGTGGGCTGTCGAGCTTACACTAGCTTTGTGAACTTGGAACCACTCTTGCCGGTGAACCGGTGGCCCCAGCCGGGGCTGGAGATTCAGTGGGTGCCACCGCCAGAACCAGTATGTGGATCCCAAGCAGATTGTGGCGGCGTTGGAGGTAACTCAACCTGCAGAGCTGACCCGTCCATGGCAGGGATCCGAAGATGTTTCTGCAACTCTGGCCTTCAATGGGACCCTGTTGGAGGAATCTGCAATCACATCATTACCTGTCAAAGTCCTCAAGGATGTGGTGGCTCCATAAATCGGAGACCCCTGATTGCAGGTTTAGTTTGTGGAGTTGGAGCAGCAATCATTACAACAACACTTTTGTTTCTACTGTACAAACGCCATGAGCGGATCAAAGAAGCTCAAGAACGGCTTGCAAGACAAAGGGAGGATATATTGAATGCCAACGGTGCAGTAAGAGCTGCAAAACTTTTCTCCGGTAGAGAGATAAAGAAATCTACAGATGACTTCTCCAAGGACCGTCTTCTCGGTGCGGGTGGCTATGGACAAGTTTACAAAGGAATTCTTGATGACGGCACAGTGGTTGCAGTAAAATGTGCTAAACTTGGCAACCCCAAAGGCACGGATCAAATCCTCAACGAGGTCCGAATTTTGTGCCAAGTCAATCACCGCAGCCTCGTTCATCTGCTTGGTTGTTGCGTCGAGCTAGAGCAACCGATCATGGTTTACGAGTACATAGAGAATGGAACCCTGCTTGAGCATCTACAAGGTCGAAAGTATAAAGCGCAAGGCTTGCTCAGTTGGAAACATCGTCTCCAAATTGCTCATGATACTGCTGAAGGTCTGGCCTATCTTCATTCCTCAGCAGTGCCTCCTATATATCATCGTGATGTCAAGTCCTCTAACATTCTGCTAGACCAGAATTTCAATGCCAAGGTCGCTGATTTCGGTCTGTCGCGGTTGGCTCACACTGATTTGAGCCACATTTCAACTTGTGCACAAGGGACTCTGGGGTACCTTGACCCTGAATACTACAGGAATTATCAGTTAACTGATAAGAGCGACGTGTACAGCTTTGGGGTTGTGTTGTTGGAGCTGCTGACATCCCAAAAGGCAATCGATTTTAACAGGGAAGCGGATGATGTGAATTTGGCAATGTATGTGCAGAGGGTGGTGCAGGAAGAGAAGTGGATAGATGTCATGGACCCGATGTTGAAGGAAGGTGCGAACCATTTGGAGGTGGAGACGATGAAGGCATTGGCATTTCTGGCATTGGGTTGCTTGGAGGAGAAGAGACAGAATCGACCCTCCATGAGAGAAGTGCTTGAGGAGATTGAATATATAATCAGTGTTGTCTCATCGAAGAATGCACAAATCTAG 1905 0.4976 MVATQYHLLFTVGFLLCAGCVMSATHCPDCGNTPVPYPLSTGPNCGVQSYKLRCLSGSLFFDTLNNSYPISSINPQAQRLVIRPATLLPRTCVTSDFVHQGVQLNSSLPFNVTSSNTILYFNCSDLLLSSPLNCSNYSLCHTYLNNTRDASPCEEAPLCCTFRAGGSSTSYMIRVRDVGCRAYTSFVNLEPLLPVNRWPQPGLEIQWVPPPEPVCGSQADCGGVGGNSTCRADPSMAGIRRCFCNSGLQWDPVGGICNHIITCQSPQGCGGSINRRPLIAGLVCGVGAAIITTTLLFLLYKRHERIKEAQERLARQREDILNANGAVRAAKLFSGREIKKSTDDFSKDRLLGAGGYGQVYKGILDDGTVVAVKCAKLGNPKGTDQILNEVRILCQVNHRSLVHLLGCCVELEQPIMVYEYIENGTLLEHLQGRKYKAQGLLSWKHRLQIAHDTAEGLAYLHSSAVPPIYHRDVKSSNILLDQNFNAKVADFGLSRLAHTDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNREADDVNLAMYVQRVVQEEKWIDVMDPMLKEGANHLEVETMKALAFLALGCLEEKRQNRPSMREVLEEIEYIISVVSSKNAQI* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00821 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pte16g00821 634 FunFam Wall-associated receptor kinase-like 20 421 633 - -
Pte16g00821 634 FunFam Wall-associated receptor kinase-like 20 307 420 - -
Pte16g00821 634 SUPERFAMILY Protein kinase-like (PK-like) 328 620 IPR011009 -
Pte16g00821 634 Gene3D Phosphorylase Kinase; domain 1 316 420 - -
Pte16g00821 634 CDD STKc_IRAK 351 621 - -
Pte16g00821 634 Pfam Protein kinase domain 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00821 634 Coils Coil 306 326 - -
Pte16g00821 634 ProSiteProfiles Protein kinase domain profile. 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte16g00821 634 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Pte16g00821 634 Gene3D Transferase(Phosphotransferase) domain 1 421 633 - -
Pte16g00821 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 627 IPR044652 GO:0004672
Pte16g00821 634 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00821 Pte-Chr16 27171342 27175016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00821 9 630 Receptor kinase-like Gene Family AT5G02070 52.160 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pte16g00821 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00821 - - cave:132186138 973.385