Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00818 ATGGCGAATCGTTGGTGGGCTGGAAATGTGGCAATGAGAGGTGCAGAACCCATGTCATCATCTCCATCTCTTCACCTGAGAAACCCGGCCGTTGAAGATGACCACGGAGGATTGGACAGACTTGGAACCAGAAGAGAGCAAGAGTTCATGGGAAGTACAAACACCCAAAACAACAACAGTACTCCAACCAATAGTAGCGCCAAAGGTAACACTAACCCAACCCCCAACACTGTCTCGCAGAGCCAAGATGATGATGGCCGAGACACCGAACATGAAGCTGATGAACAAAACCAGGGTAGTCAAGAAGCTGTGGAGCCTGGTAGCAGTGGAGGTCGGCGACCTCGAGGTCGCCCACCGGGGTCGAAAAACAAACCGAAACCCCCGATAGTGATAACTAAGGAAAGCCCCAATGCACTCAGAAGCCATGTGTTGGAAATCAGCAGTGGAAGTGATATAGTTGAGAGTATTGCTACCTTTGCAAATCGAAGACAAAGGGGGGTGTCTGTCCTCAGTGGGAGTGGCATTGTTACAAATGTTACACTTAGGCAACCAGTTGCACCAGGTGGGGTGGTTACTCTTCATGGAAGGTTCGAGATATTATCACTGTCGGGTGCTTTCCTGCCGGCCCCATCGCCACCGGGAGCCACGGTGCTAACTGTGTATTTGGCCGGTGGGCAGGGGCAGATTGTTGGCGGTACTGTTGCTGGTGCACTGGTGGCTTCAGGGCCTGTAATGGTGATTGCAGCTACTTTTACAAATGCAACTTATGAAAGGTTACCGTTAGAGAGTGAGTCAGCTGGGGAGGAAATACAAGTGCAGCAGCAACAATCAACAGTGAATTCAGGAACTACTACTACTGGGAATAGTTCCACATCTCAAGGTTTGGGTGCACAGGTTTCATCAATGGCTATGTATAATTTGCCTCCAAATTTATTACCAAATGGTCAAATGCAGCATGATGTGTTTTGGGGTGTTCCACCCCGGCCTCCTCCATCTTTCTGA 1002 0.497 MANRWWAGNVAMRGAEPMSSSPSLHLRNPAVEDDHGGLDRLGTRREQEFMGSTNTQNNNSTPTNSSAKGNTNPTPNTVSQSQDDDGRDTEHEADEQNQGSQEAVEPGSSGGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEISSGSDIVESIATFANRRQRGVSVLSGSGIVTNVTLRQPVAPGGVVTLHGRFEILSLSGAFLPAPSPPGATVLTVYLAGGQGQIVGGTVAGALVASGPVMVIAATFTNATYERLPLESESAGEEIQVQQQQSTVNSGTTTTGNSSTSQGLGAQVSSMAMYNLPPNLLPNGQMQHDVFWGVPPRPPPSF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00818 333 MobiDBLite consensus disorder prediction 28 46 - -
Pte16g00818 333 MobiDBLite consensus disorder prediction 83 98 - -
Pte16g00818 333 CDD DUF296 140 251 IPR005175 -
Pte16g00818 333 MobiDBLite consensus disorder prediction 47 82 - -
Pte16g00818 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 140 253 IPR005175 -
Pte16g00818 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 264 - -
Pte16g00818 333 ProSiteProfiles PPC domain profile profile. 136 273 IPR005175 -
Pte16g00818 333 FunFam AT-hook motif nuclear-localized protein 139 266 - -
Pte16g00818 333 MobiDBLite consensus disorder prediction 267 295 - -
Pte16g00818 333 Gene3D - 139 280 - -
Pte16g00818 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 67 325 IPR014476 GO:0003680
Pte16g00818 333 MobiDBLite consensus disorder prediction 1 136 - -
Pte16g00818 333 MobiDBLite consensus disorder prediction 265 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00818 Pte-Chr16 27085794 27088002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00818 1 334 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 52.874 5.39e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00818 - - qsu:112039774 437.958