Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00800 ATGGCAAACATTGCTACCTTCTTCAACAAGTTCATCTATTTGTTCCTTCTTCTCATTCACCTTGGCTGTTTCTTCATATCAACCACAAAAACTATAACCAGCGACCACCATAGCCAGAACCCAATTTCTAGAAAGCGCAAGGTATCGTCTTTCTCTGATCCTTCAGATTCCAAACGAAAAACTCAGAAATCTCTTTGCTCTTCTTGGTCGTTCATCAAGCTATTGTTCACGTCAAAGTCGCAAAAAAACATTCATGCCGACACAGAGAAAACTCGGTCCACGGCCACCGGTGCTTCAACATCTGCAAGATCATCCCAGCAAGCTTTGGTCTTGCTCATGCAACCCGAATCGCAGTCACCAGAGCCGCATAGGAAACCACTGGGACCCTGTTTAGAATCTAATCTGTCCTCTGACAACACTTTCTTCCCTCTGCGTAATGACATTTTTCCTTGTACTGCATGTGGTGAGATTTTCCAGACACCCCAGTTGCTTGAACAGCACCAATCTTTGCAACACGCTGTTTCAGCGCTCATCGATGGCGATACAGGTAACAATATAGTCAGAATCATATTCAAAACAGGTTGGACTGACAGCCAGAAAAACCCAAGGATAGTTCGGATCCTGAAGATCCATAACAGCACTAAGATCCTGTGCAAGTTTGAAGAGTATAGAGAAGCTGTTAAAGCTAAAGCAGCTTTGAAGAAACGTGATGAGAGGTGCATAGCTGATGGGAATGAACTATTGAGGTTTCACTGTTCAACTTTTCTCTGTGATTTAGGACTCAAAGGCCAATCTAGCATCTGCAACCAGCAGTACTGTAATATCTGCGGGATTATCAAGTCTGGATTTTCAACAAAGCTAGATGGGATTTCCACATTTTCTAGTAGCTGGAGGGCACACCTATGTATACCTGAGGAGATTGAGCAAGAGTTCAAGTTCATGAATGTCAAAAGAGCCATGCTGGTTTGTCGGGTCGTTGCAGGCCGAGTCGGGTGCGATTCGGATGAGGTGGATAAGGAGGATGGCGGGTACGACTCTCTGATGTCAAGAAGCGTTAATGGGGTTCCTACCAGGTCGGATGAGGAGGACTTATTGGTGTTCAATCCTAGAGCCGTGCTACCTTGTTTTGTGATTGTGTATACTGTTTGA 1149 0.4465 MANIATFFNKFIYLFLLLIHLGCFFISTTKTITSDHHSQNPISRKRKVSSFSDPSDSKRKTQKSLCSSWSFIKLLFTSKSQKNIHADTEKTRSTATGASTSARSSQQALVLLMQPESQSPEPHRKPLGPCLESNLSSDNTFFPLRNDIFPCTACGEIFQTPQLLEQHQSLQHAVSALIDGDTGNNIVRIIFKTGWTDSQKNPRIVRILKIHNSTKILCKFEEYREAVKAKAALKKRDERCIADGNELLRFHCSTFLCDLGLKGQSSICNQQYCNICGIIKSGFSTKLDGISTFSSSWRAHLCIPEEIEQEFKFMNVKRAMLVCRVVAGRVGCDSDEVDKEDGGYDSLMSRSVNGVPTRSDEEDLLVFNPRAVLPCFVIVYTV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00800 382 ProSitePatterns Zinc finger C2H2 type domain signature. 151 172 IPR013087 -
Pte16g00800 382 MobiDBLite consensus disorder prediction 34 61 - -
Pte16g00800 382 SUPERFAMILY ADP-ribosylation 175 381 - -
Pte16g00800 382 Gene3D - 175 381 - -
Pte16g00800 382 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 68 380 - -
Pte16g00800 382 MobiDBLite consensus disorder prediction 34 48 - -
Pte16g00800 382 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 173 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00800 Pte-Chr16 26602727 26604452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00800 69 383 C2H2 Transcription Factor Family AT2G29660 55.455 4.87e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte16g00800 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00800 - - qsa:O6P43_014008 524.242