Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00797 ATGGCCAATTTACGTGAAAGTATTGAAGAGGTGCAACTCTCCAATATTGAACAAGGTTTCCGATCCTCCATCAAGCCAAACGAAAACCCTAATGCTGGCTGTCTCTCATCACCAGAAACTGTAACAATGATCCAGAAGGTTATTGCAGAGTTTGTTGGTACGTACATGGTGATATTTGCTGGATGTGGGTCTGTTACAGTGAACAAAATCTATGGGTCTGTTACATTCCCAGGCATTTGTGTCACATGGGGTCTGATTGTAGCAGTCATGATTTACAGTATTGGTCACATCTCAGGGGCTCACTTCAATCCAGCTGTGACAATCACATTCAGTCTCTTCCGACGCTTCCCCTACAAACAGGCACCTTTGTATATAATTGCTCAGATAATCGGATCCATCCTTGCCAGTGGGACATTAGCTTTGATCTTTGATGTTACACCTAAGGATTTCTTTGGGACAGTGCCAGCTGGCTCTAATCAACAGTCGTTGGTTCTGGAAATCATCATCTCTTTCATTTTGATGTTTGTCATCTGTGGTTCTGGTACAGACAATAGAGCAATAGGTGAATTGTCTGGGCTTGCAGTTGGGATGACAATACTGCTGAATGTTCTTGTTGCAGGGCCTGTCTCTGGAGCATCAATGAACCCAGCAAGAAGCATTGGCCCTGCAGTGGTGAAACATGTTTACAAGGGTTTATGGGTATACATAATAGGACCCATCGTTGGAACAATTTGTGGAGCATTTGTTTATTGCTTGATGAGACAAACAGACAAGACACTGTCAGAGGTAAGCAGGGCAGGATCAATCTTCAAGAGTACAAGAACAGATCAATGA 834 0.4329 MANLRESIEEVQLSNIEQGFRSSIKPNENPNAGCLSSPETVTMIQKVIAEFVGTYMVIFAGCGSVTVNKIYGSVTFPGICVTWGLIVAVMIYSIGHISGAHFNPAVTITFSLFRRFPYKQAPLYIIAQIIGSILASGTLALIFDVTPKDFFGTVPAGSNQQSLVLEIIISFILMFVICGSGTDNRAIGELSGLAVGMTILLNVLVAGPVSGASMNPARSIGPAVVKHVYKGLWVYIIGPIVGTICGAFVYCLMRQTDKTLSEVSRAGSIFKSTRTDQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00797 277 NCBIfam MIP family channel protein 49 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 SUPERFAMILY Aquaporin-like 41 258 IPR023271 -
Pte16g00797 277 CDD MIP 45 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Pte16g00797 277 Gene3D Glycerol uptake facilitator protein. 11 264 IPR023271 -
Pte16g00797 277 Pfam Major intrinsic protein 40 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 233 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 196 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte16g00797 277 PANTHER AQUAPORIN NIP2-1 25 261 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00797 Pte-Chr16 26554292 26555632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00797 1 272 Major Intrinsic Protein MIP AT5G37820 62.545 1.45e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00797 K09874 - qsu:111995468 385.571