Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00795 ATGGACTCTACCCCTCCACTTCTCTCTTCTCCATCTTCGTATTCTTCGAGTTCTTCCTCTTCTTCTTCGTCATTACCCGACGTTCATGGTCCACCAGACTCGTTTTCCGAGGTTGGTAATATGGCTAAATCGCCTTTGGCGGTTCGTGTAGCCCTCCAACTCCTCCAATCGGACGACCCAGATTCCAAGCTCCAAGCCGCTAGAGAAATTAGAAGGCTTACTAAGAACTCACAGCGTTGTCGCCGACAGCTCTCGCAAGCTGTTTTACCACTCGTCTCCATGCTCCGAGTCGACTCATTCGAGTTTCACGAGGCTGCTCTTCTTGCACTCCTTAATCTCGCTGTCAGAGATGAAAAGAACAAAATCAAAATCGTGGAAGCTGGTGCTTTAGTTCCAATCACTGGCTTCCTCAAATCACGAAATCCAAATCTGCAAGAGTATGCAACAGCATCTTTGCTCACTTTGTCTGCTTCTGCAACCAACAAACCAATCATAAGTGCTTCTGGCGTCATTCCTCTTCTTGTTGAAATTCTTAGAGATGGCCAAATCTGA 552 0.4692 MDSTPPLLSSPSSYSSSSSSSSSSLPDVHGPPDSFSEVGNMAKSPLAVRVALQLLQSDDPDSKLQAAREIRRLTKNSQRCRRQLSQAVLPLVSMLRVDSFEFHEAALLALLNLAVRDEKNKIKIVEAGALVPITGFLKSRNPNLQEYATASLLTLSASATNKPIISASGVIPLLVEILRDGQI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00795 183 Gene3D - 37 182 IPR011989 -
Pte16g00795 183 SMART arm_5 117 157 IPR000225 GO:0005515
Pte16g00795 183 SMART arm_5 76 115 IPR000225 GO:0005515
Pte16g00795 183 MobiDBLite consensus disorder prediction 1 29 - -
Pte16g00795 183 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 86 128 IPR000225 GO:0005515
Pte16g00795 183 MobiDBLite consensus disorder prediction 1 39 - -
Pte16g00795 183 PANTHER U BOX DOMAIN-CONTAINING 29 181 - -
Pte16g00795 183 SUPERFAMILY ARM repeat 48 181 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00795 Pte-Chr16 26544024 26546500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00795 88 183 U-box Gene Family AT1G23030 32.292 1.58e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00795 - - gmx:100780954 196.052