Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00792 ATGGAGAAATCTTCAATTGTCAGAAAAGGTGCTTGGATGAAAGAAGAAGATGACCTTCTCAGGGATTGTATTGAGAAATACGGCGAAGGCAAATGGCATCTTGTTCCTCAAAGAGCAGGGCTGAAAAGATGTCGGAAAAGCTGTAGGTTGAGATGGTTGAACTATCTGAAGCCAACAATCAAGAGGGGAGGCTTCGAAGCAGATGAGATTGACTTAATTCTCCGATTGCACAGATTACTAGGGAACAGATGGTCACTCATTGCTGGAAGACTTCCCGGACGAACACCTAACGATGTGAAGAACTTCTGGCATACCCACTTACGAAAGCTGTTGATAACTGGTGAGGATCACAAACAAACAAAGTTGAAGGGACCAGATTTGCAAAACCAAGTCACGATAAAACCACAGCCAACAACTTTATCATCAAACAATCGGCCATTGGCAACCGGCTGGACCCCTTCTTGTGAAGGGGAGGATTGCCACAACACAGCAATGGGCCTTGCCACAAACTCATCTTCCAGTCAGTCGACCCCAGAAAATTGGACAGAGTGGTTGACGAGTTTGATGGACTTTGAAGACAAGGGAGAGAACGATAAAATGACCAGCACATGCTTTGTTAATCTCCAACATGCAGTGGATAAAGACAATGACTTATGGGATGAAGAAATGGACGAATCTATTTCTTTCAAAGACCTAAGTTGTTGGAATGATTTGTCTTTCGACATGAATGTTTAG 735 0.4354 MEKSSIVRKGAWMKEEDDLLRDCIEKYGEGKWHLVPQRAGLKRCRKSCRLRWLNYLKPTIKRGGFEADEIDLILRLHRLLGNRWSLIAGRLPGRTPNDVKNFWHTHLRKLLITGEDHKQTKLKGPDLQNQVTIKPQPTTLSSNNRPLATGWTPSCEGEDCHNTAMGLATNSSSSQSTPENWTEWLTSLMDFEDKGENDKMTSTCFVNLQHAVDKDNDLWDEEMDESISFKDLSCWNDLSFDMNV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00792 244 Gene3D - 9 61 - -
Pte16g00792 244 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 189 - -
Pte16g00792 244 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Pte16g00792 244 FunFam Myb transcription factor 9 61 - -
Pte16g00792 244 CDD SANT 67 107 IPR001005 -
Pte16g00792 244 CDD SANT 11 56 IPR001005 -
Pte16g00792 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Pte16g00792 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Pte16g00792 244 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Pte16g00792 244 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Pte16g00792 244 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Pte16g00792 244 Gene3D - 64 134 - -
Pte16g00792 244 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Pte16g00792 244 SMART sant 8 58 IPR001005 -
Pte16g00792 244 SMART sant 61 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00792 Pte-Chr16 26491457 26493461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00792 7 191 MYB Transcription Factor Family AT1G66370 50.777 8.94e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte16g00792 Myb_DNA-binding 1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00792 - K16166 gmx:100781091 221.476