Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00791 ATGAAGAGGGATCACCAGAAAGTTTATGATGGCAGTAGTGTTGGGTGTAATAGCAATTGTGATGGTACTACCAGTACTGCTGCAAAAGCTGACAGCTCATCCATGTCAATTGGGAAAATGAATATGTGGGAAGACGAAGAACCAGAAGCGAGCGGAATGGATGAATTGCTAGCTGTTCTGGGTTACAGGGTACGGTCTTCAGACATGGTTCAGGTTGCTCAGAAGCTTGAGCAGCTTGAGATGGCCATGGGATCAGCGCAAGATGGGATTTCTCATTTAGCTTCTGATACCGTTCATTATGACCCTTCTGATATGTCTGCTTGGGTTCAAAGCATGCTCTCTGATCTGGCTCCAACCGAGACTTCAACCACCATTACCACAGTCGATACCCAGTCTCGAGTTTTTGCCGATGATTCGGAGTACGACCTCAGAGCAATTCCTGGTGTGGCTGCGTACCCACAAAGAGAGCTAGCATCTTCTACTGAATCAAGCAGGAAAAGGTTCAAACCTTCAATTGAATCTGCGAGTTCTGTTCAGCTCTTACCTTCAACTACAACACCGTCAGCGATTGCTAGTGGTTCTTCTACTCGACCAGTCGTACTTGTTGGCTCACAAGAAAATGGCGTCCGTCTCGTCCACTCTCTCTTGGCCTGTGCAGAAGCCGTTCAGCAAGGCAATGTAAAACTTGCTGATACGCTTGTGAAGCACATAGGTTTGCTCACTGCTACTCAAGTGGGCGCCATGAAAAAAGTCGCCACTTTCTTTGCTCAAGCTCTGACTCGCCGGATTTACAGACTCTGCCCTGCACAAGATTTCGCAGATTCTTCCAGCTCCGATCTCCTTGAGATGCATTTCTACGAGTCCTCACCGTACCTCAAATTCGCTCACTTCACCGCCAACCAATCTATACTCGAAGCTTTCGCCACAGCTAGCAGGGTACATGTCATCGATTTTGGACTCAAGCAAGGTATGCAATGGCCGGCGTTGATGCAAGCTCTTGCATTACGACCCGGTGGACCACCGGATTTCCGGTTAACCGGAATTGGACCTCCTCAGCCTGACAACACCGACGCTCTGCAAGAGGTAGGTTGGAAGTTAGCTCAGTTAGCTGAAACCATTGGCGTCAAGTTCGAATTCCGCGGGTTTGTCTGCAACAGTTTAGCGGATCTTGACCTGTCCATGCTCGAGATCCGACCCGAGGAGATCGAAACTCTGGCCGTCAATTCGGTTTTCGAGCTCCACCGGTTACTCGCCCGACCCGGAGGAATTGAAAAGGTTTTGAATTCGATCAAAGCAATAAACCCTAAAATCGTGACTGTCGTAGAACAAGAAGCGAATCACAACGAACCGATTTTTCTAGATCGGTTCACTGAAGCATTGCATTATTACTCAACCTTGTTCGACTCGTTGGAAGGATCGTCTTCCGGGTTGAGTCCAACGAGTCAAGACGTTGTCATGTCGGAAATTTACTTGGGCAAACAAATATGTAGCGTGGTGGCCTGTGAAGGACCAGACCGAGTTGAAAGGCACGAGACTCTAAATCAATGGAGGATCCGTATGAGCTCAGCCGGGTTCGAGCCGGTTCATCTCGGATCCAACGCGTTCAAGCAAGCTAGCATGCTGTTGGCTCTATTTGCAGGTGGTGATGGTTACAGAGTAGAAGAGAACAATGGTTCCCTCATGCTTGGTTGGCATACACGACCACTCATCTCCGCCTCAGCTTGGAAAATCGCTGGGGGTGAGTGA 1746 0.4891 MKRDHQKVYDGSSVGCNSNCDGTTSTAAKADSSSMSIGKMNMWEDEEPEASGMDELLAVLGYRVRSSDMVQVAQKLEQLEMAMGSAQDGISHLASDTVHYDPSDMSAWVQSMLSDLAPTETSTTITTVDTQSRVFADDSEYDLRAIPGVAAYPQRELASSTESSRKRFKPSIESASSVQLLPSTTTPSAIASGSSTRPVVLVGSQENGVRLVHSLLACAEAVQQGNVKLADTLVKHIGLLTATQVGAMKKVATFFAQALTRRIYRLCPAQDFADSSSSDLLEMHFYESSPYLKFAHFTANQSILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPDFRLTGIGPPQPDNTDALQEVGWKLAQLAETIGVKFEFRGFVCNSLADLDLSMLEIRPEEIETLAVNSVFELHRLLARPGGIEKVLNSIKAINPKIVTVVEQEANHNEPIFLDRFTEALHYYSTLFDSLEGSSSGLSPTSQDVVMSEIYLGKQICSVVACEGPDRVERHETLNQWRIRMSSAGFEPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLISASAWKIAGGE* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00791 581 Gene3D - 52 116 IPR038088 -
Pte16g00791 581 Pfam Transcriptional regulator DELLA protein N terminal 54 120 IPR021914 -
Pte16g00791 581 FunFam DELLA protein GAI 52 116 - -
Pte16g00791 581 ProSiteProfiles GRAS family profile. 202 576 IPR005202 -
Pte16g00791 581 MobiDBLite consensus disorder prediction 1 33 - -
Pte16g00791 581 SMART DELLA_2 54 126 - -
Pte16g00791 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 160 572 IPR005202 -
Pte16g00791 581 MobiDBLite consensus disorder prediction 11 33 - -
Pte16g00791 581 Pfam GRAS domain family 211 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00791 Pte-Chr16 26465175 26467612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00791 39 578 GRAS Transcription Factor Family AT1G14920 63.401 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte16g00791 GRAS 8.2e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00791 K14494 - qsa:O6P43_020590 830.091