Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte16g00773 ATGAGTTGCAGGGGGAATGACAGTCTTTCAGGTGATCAACAGGAAGGTTCCGGTTCTCGCAGTGGAAAAAAGCCTTTCCATCGTCACACCCCTCACCAGAAACAGCGACTTGAAGATTTTTTCAAGTACTGCCCACATCCTGATGACAATCAACGGCGCCAATTGGGAAGGGAACTCGGGCTTGATCCAAACAAAGTAAAATTTTGGTTCCAGAACAAGAGAACTTATCTGAAGACTCAAAGTGAGCGTGCAAATAATGCTGCACTCAAAGCTGAGAATGAAAGCATCCGTTTCGAAAACCTTGTTATGAGAGATGCATTGGAGAGTGCACGATGTGATTCCTGTAGGGGTGTCCCCTTAGGGGAAGAAGAACGGCAACGTTACCTACAATCACTGCAGCTGGAAAATGCTCGATTAAGAGAAGAGCATGAGAGGTTATCAATCTTTGTAGCAAGTTGTGTGGGGAAAAGGGCACTACTCGAGCCTTTGATCGGTGCCACAGGATCTCCATTGGATTTGCCGTCAGGAAGTTCCATAACTGTGAGAACTCCTATCCTAGATCCTTCTTCTGGTCCTGCAACTTCAAACAGCACCATGCTGCATCATCAAATAAAGGAAATTACTTCTATGGAGAAAGCCCGAATGAGGGAGATTGCTGCTAGTGCCATGGGGGAATTAGTCAAGCTTCTGCAATCCAATGAACCCTTTTGGATGAAATCTTCTTCTTCTGATGGATTTGTACTTAATCATGACAATTATGATAGGGTATTCCCTAGGATTTATTTCAAAAGTCCTGGTGCTCGTGTTGAGTCATCAAAAGACTCAGGAATGGTATCTGAGAATGCAATCCAATTGGTTGACATGTTTTTAAATTCGGATAAATGGGTGGATCTTTTTCCAAATATCACTAGGAAAGCTAAGACGATCTATGTGGTTGAAAATGGTTTAATGGGAATTAGAAATGGTTCCTTGCAGCTGATGTATCAGCAAATGCACAGTCTTTCACCTTTGGTTCCAACTCGAGAATTCTACTTTCTTCGCCATTGTCTGCAGATTGAGATGGGCACATGGGTGATTGTGGATATCTCTTGTGATTGCTTCAAAGAGAATGATTCCACTCCCAGGTGTTGGAGGTTTCCTTCTGGATGCATGATTCATCAAATATCAAATGGTTGCACAGAGGTTACATGGGTTGAGCATGTGGAAATTGATGATGAAATCCAAACTCATCAGCTTTACAAAGATCTTATCTGTAGCAATGTTGTATATGGAGCACAAAGGTGGATTGCCACACTTCAGAGAATGTGTGAGAGACTTGTGTCTGCATCAAACCGAAGTCCTGTGAGTCATAAACATTTTCAAGGAGAAGCTAGGAGGAGGCTCATGGAGCTTTCCCATAGGATGGTGAAAAATTTTTGTGGAATTTTTAGCATGCCTGGGAAACTGGACTTGACTCATTTGTCTGAGGTGAAAAATAGTGGGGCACAATTTTCTGTTCGTGAGAATACAGAACAAGGATATGCAGATAGCTTGATTATCTCTGCTTCTACCTCCCTGTGGATACCTCTGCCACCTCAGAATGTTTTTGACTTCTTTCGAAACAGCAAAACTCGTGCCCAGTGGGATGTTCGTACTGATGGAAATCCAGTTCTGGAGATTTTAAATATCGCAAGTGGAACTCATCCAGGGAACTGTATATCCCTGATTCAGCCTTTGGGCCCTTCTGAGCAGAGCACGGTTGTGCTTCAAGAAATCTGCGTTGACCCTCTGGTTTCAATGATCATATATGCTCCAATGGATGTTTCACTGATAAATATTGCAGTTAACCACAATGATTCCTCAAGCATACCTATCCTACCATCAGGCCTCATTGTCTCCGGTGATGGACACCAAGATAGCGGCACCGGGGCATCCACCGGTTCAAACGTTGGAACCAGTGGTGGTTCACTGCTCACTGTGTTTTTTCAGGTTCTGGCTACCCACCTTTCACCACCAAAGCAGCTGAACGTTGAAGCAATTTTAACGGTGAATGCTCTAGTGAGCAGCACTGTCAAAAAAATTAAAGCTGCTTTAAATTGTTCGGAGCTAGAGTAG 2094 0.4346 MSCRGNDSLSGDQQEGSGSRSGKKPFHRHTPHQKQRLEDFFKYCPHPDDNQRRQLGRELGLDPNKVKFWFQNKRTYLKTQSERANNAALKAENESIRFENLVMRDALESARCDSCRGVPLGEEERQRYLQSLQLENARLREEHERLSIFVASCVGKRALLEPLIGATGSPLDLPSGSSITVRTPILDPSSGPATSNSTMLHHQIKEITSMEKARMREIAASAMGELVKLLQSNEPFWMKSSSSDGFVLNHDNYDRVFPRIYFKSPGARVESSKDSGMVSENAIQLVDMFLNSDKWVDLFPNITRKAKTIYVVENGLMGIRNGSLQLMYQQMHSLSPLVPTREFYFLRHCLQIEMGTWVIVDISCDCFKENDSTPRCWRFPSGCMIHQISNGCTEVTWVEHVEIDDEIQTHQLYKDLICSNVVYGAQRWIATLQRMCERLVSASNRSPVSHKHFQGEARRRLMELSHRMVKNFCGIFSMPGKLDLTHLSEVKNSGAQFSVRENTEQGYADSLIISASTSLWIPLPPQNVFDFFRNSKTRAQWDVRTDGNPVLEILNIASGTHPGNCISLIQPLGPSEQSTVVLQEICVDPLVSMIIYAPMDVSLINIAVNHNDSSSIPILPSGLIVSGDGHQDSGTGASTGSNVGTSGGSLLTVFFQVLATHLSPPKQLNVEAILTVNALVSSTVKKIKAALNCSELE* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte16g00773 697 SUPERFAMILY Homeodomain-like 16 81 IPR009057 -
Pte16g00773 697 MobiDBLite consensus disorder prediction 1 20 - -
Pte16g00773 697 MobiDBLite consensus disorder prediction 1 32 - -
Pte16g00773 697 SMART START_1 217 438 IPR002913 GO:0008289
Pte16g00773 697 Gene3D - 9 96 - -
Pte16g00773 697 ProSiteProfiles START domain profile. 208 441 IPR002913 GO:0008289
Pte16g00773 697 CDD homeodomain 23 81 IPR001356 GO:0003677
Pte16g00773 697 ProSiteProfiles 'Homeobox' domain profile. 20 80 IPR001356 GO:0003677
Pte16g00773 697 Pfam START domain 217 438 IPR002913 GO:0008289
Pte16g00773 697 Gene3D - 215 430 IPR023393 -
Pte16g00773 697 SUPERFAMILY Bet v1-like 216 438 - -
Pte16g00773 697 SUPERFAMILY Bet v1-like 456 672 - -
Pte16g00773 697 Coils Coil 122 149 - -
Pte16g00773 697 CDD START_ArGLABRA2_like 212 437 - -
Pte16g00773 697 Pfam Homeodomain 27 75 IPR001356 GO:0003677
Pte16g00773 697 FunFam Homeobox-leucine zipper protein HDG1 10 96 - -
Pte16g00773 697 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 692 IPR042160 -
Pte16g00773 697 SMART HOX_1 22 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte16g00773 Pte-Chr16 25424194 25429107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte16g00773 23 692 Homeobox Transcription Factor Family AT1G73360 41.991 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte16g00773 START 3e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte16g00773 K09338 - qsa:O6P43_014240 780.4